RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 Q6YL49 198 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 DNAJC10Q8IXB1 793 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 BEND2Q8NDZ0 799 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 BRIX1Q8TDN6 353 aaKnown RBP4.82□□□□□ -1.64
CD44-219ENST00000525685 RUNDC1Q96C34 613 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 ANKFY1Q9P2R3 1169 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 DDX20Q9UHI6 824 aaKnown RBP4.82□□□□□ -1.64
CD44-219ENST00000525685 SLC23A1Q9UHI7 598 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 PCDHA6Q9UN73 950 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 ATP11BQ9Y2G3 1177 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 KDM6BO15054 1643 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 TIAM1Q13009 1591 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 EHBP1L1Q8N3D4 1523 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 TEX14Q8IWB6 1497 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 MYO5CQ9NQX4 1742 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 PNPLA7Q6ZV29 1317 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 A0A1W2PPL8 197 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 CFAP69A5D8W1 941 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 CDHR4A6H8M9 788 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 CAPN8A6NHC0 703 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 F2RL2O00254 374 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 ERN1O75460 977 aaKnown RBP4.81□□□□□ -1.64
CD44-219ENST00000525685 TUSC2O75896 110 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 HAUS5O94927 633 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 LMNAP02545 664 aaKnown RBP4.81□□□□□ -1.64
CD44-219ENST00000525685 GNAI2P04899 355 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 SPATA31D3P0C874 917 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 PIK3CGP48736 1102 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 PSMC1P62191 440 aaKnown RBP4.81□□□□□ -1.64
CD44-219ENST00000525685 TAP1Q03518 808 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 PLS1Q14651 629 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 KIAA0753Q2KHM9 967 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 ANO6Q4KMQ2 910 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 CCDC93Q567U6 631 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 DACT2Q5SW24 774 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 HECTD2Q5U5R9 776 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 DARS2Q6PI48 645 aaKnown RBP4.81□□□□□ -1.64
CD44-219ENST00000525685 NPNTQ6UXI9 565 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 SPATA31D4Q6ZUB0 917 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 ZNF575Q86XF7 245 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 DGKHQ86XP1 1220 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 PCSK9Q8NBP7 692 aaKnown RBP4.81□□□□□ -1.64
CD44-219ENST00000525685 CPEB3Q8NE35 698 aaKnown RBP4.81□□□□□ -1.64
CD44-219ENST00000525685 IL17RDQ8NFM7 739 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 TTC17Q96AE7 1141 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 DMRTA2Q96SC8 542 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 ADAM2Q99965 735 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 C1orf43Q9BWL3 253 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 B3GNT5Q9BYG0 378 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 WDR11Q9BZH6 1224 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 TOR3AQ9H497 397 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 FBXO34Q9NWN3 711 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 CFAP97Q9P2B7 532 aa4.81□□□□□ -1.64
CD44-219ENST00000525685 USP15Q9Y4E8 981 aaPredicted RBP4.81□□□□□ -1.64
CD44-219ENST00000525685 CD109Q6YHK3 1445 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 PREX2Q70Z35 1606 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 FAM227AF5H4B4 570 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 MGEA5O60502 916 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 AGFG2O95081 481 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 SBK3P0C264 359 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 NBPF7P0C2Y1 421 aaPredicted RBP4.8□□□□□ -1.64
CD44-219ENST00000525685 BMP5P22003 454 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 SLC6A2P23975 617 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 DDX6P26196 483 aaKnown RBP eCLIP4.8□□□□□ -1.64
CD44-219ENST00000525685 CACNB3P54284 484 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 GPSM2P81274 684 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 AGAP9Q5VTM2 703 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 OVCH2Q7RTZ1 564 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 SRGAP1Q7Z6B7 1085 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 DCBLD1Q8N8Z6 715 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 SLC17A8Q8NDX2 589 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 TIFAQ96CG3 184 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 IMPG2Q9BZV3 1241 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 CYP4F11Q9HBI6 524 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 SYBUQ9NX95 663 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 SIDT1Q9NXL6 827 aaKnown RBP4.8□□□□□ -1.64
CD44-219ENST00000525685 JKAMPQ9P055 326 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 GABBR1Q9UBS5 961 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 MAP3K2Q9Y2U5 619 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 MTO1Q9Y2Z2 717 aaKnown RBP4.8□□□□□ -1.64
CD44-219ENST00000525685 FPGT-TNNI3KV9GXZ4 949 aa4.8□□□□□ -1.64
CD44-219ENST00000525685 CFAP74Q9C0B2 1584 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 ARAP3Q8WWN8 1544 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 PLEKHD1A6NEE1 506 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 UNC119BA6NIH7 251 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 PLIN1O60240 522 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 SLC43A1O75387 559 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 GJB1P08034 283 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 CKBP12277 381 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 PRDX5P30044 214 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 RAB1AP62820 205 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 GUCY1B3Q02153 619 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 HLTFQ14527 1009 aaKnown RBP eCLIP4.79□□□□□ -1.64
CD44-219ENST00000525685 GBX1Q14549 363 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 SPDYE7PQ495Y7 208 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 COBLL1Q53SF7 1204 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 RHOT2Q8IXI1 618 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 FAM156AQ8NDB6 213 aa4.79□□□□□ -1.64
CD44-219ENST00000525685 OR56A1Q8NGH5 318 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms