RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 PRRX2Q99811 253 aa11.3□□□□□ -0.6
RBBP4-216ENST00000525506 FAM213AQ9BRX8 229 aa11.3□□□□□ -0.6
RBBP4-216ENST00000525506 PLA2G2FQ9BZM2 168 aa11.3□□□□□ -0.6
RBBP4-216ENST00000525506 CRISPLD1Q9H336 500 aa11.3□□□□□ -0.6
RBBP4-216ENST00000525506 HSPBP1Q9NZL4 362 aa11.3□□□□□ -0.6
RBBP4-216ENST00000525506 CEP72Q9P209 647 aa11.3□□□□□ -0.6
RBBP4-216ENST00000525506 WNT16Q9UBV4 365 aa11.3□□□□□ -0.6
RBBP4-216ENST00000525506 AFF4Q9UHB7 1163 aaKnown RBP11.3□□□□□ -0.6
RBBP4-216ENST00000525506 HOOK1Q9UJC3 728 aaKnown RBP11.3□□□□□ -0.6
RBBP4-216ENST00000525506 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
RBBP4-216ENST00000525506 ZFP37Q9Y6Q3 630 aaPredicted RBP11.3□□□□□ -0.6
RBBP4-216ENST00000525506 ZNF638Q14966 1978 aaKnown RBP11.29□□□□□ -0.6
RBBP4-216ENST00000525506 ZNF233A6NK53 670 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 PIRO00625 290 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 PRPF40AO75400 957 aaKnown RBP11.29□□□□□ -0.6
RBBP4-216ENST00000525506 SOAT2O75908 522 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 OAZ2O95190 189 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 GJA1P17302 382 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 AOC1P19801 751 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 CASP1P29466 404 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 PNPLA4P41247 253 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 STK4Q13043 487 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 SNW1Q13573 536 aaKnown RBP11.29□□□□□ -0.6
RBBP4-216ENST00000525506 NFIL3Q16649 462 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 PRSS36Q5K4E3 855 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 OVOS1Q6IE37 1185 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 USP37Q86T82 979 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 SLC9A9Q8IVB4 645 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 TTC9BQ8N6N2 239 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 XXYLT1Q8NBI6 393 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 SPATA20Q8TB22 786 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 NOC3LQ8WTT2 800 aaKnown RBP11.29□□□□□ -0.6
RBBP4-216ENST00000525506 CACTINQ8WUQ7 758 aaKnown RBP11.29□□□□□ -0.6
RBBP4-216ENST00000525506 ZSWIM3Q96MP5 696 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 PCIF1Q9H4Z3 704 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 TBC1D17Q9HA65 648 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 SLC39A2Q9NP94 309 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 RMND1Q9NWS8 449 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 DPP3Q9NY33 737 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 ITGA11Q9UKX5 1188 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 SLC27A5Q9Y2P5 690 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 DENND4CQ5VZ89 1909 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 TICRRQ7Z2Z1 1910 aa11.29□□□□□ -0.6
RBBP4-216ENST00000525506 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-216ENST00000525506 PDXKO00764 312 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 MOSPD3O75425 235 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 DCNP07585 359 aaKnown RBP11.28□□□□□ -0.6
RBBP4-216ENST00000525506 MYL4P12829 197 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 TYMPP19971 482 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 RFX1P22670 979 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 DUSP4Q13115 394 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 SNRNP35Q16560 246 aaKnown RBP11.28□□□□□ -0.6
RBBP4-216ENST00000525506 COBLL1Q53SF7 1204 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 TANGO2Q6ICL3 276 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 MTSS1LQ765P7 747 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 WDR49Q8IV35 697 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 GUF1Q8N442 669 aaKnown RBP11.28□□□□□ -0.6
RBBP4-216ENST00000525506 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 ATAD1Q8NBU5 361 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 OR10T2Q8NGX3 314 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 SPATA18Q8TC71 538 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 ZNF560Q96MR9 790 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 GSDMAQ96QA5 445 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 FOXQ1Q9C009 403 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 KCTD10Q9H3F6 313 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 ARHGEF3Q9NR81 526 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 SLC2A4RGQ9NR83 387 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 DSEQ9UL01 958 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 TRAF3IP3Q9Y228 551 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 YIPF1Q9Y548 306 aa11.28□□□□□ -0.6
RBBP4-216ENST00000525506 KIF26AQ9ULI4 1882 aaPredicted RBP11.27□□□□□ -0.6
RBBP4-216ENST00000525506 OR6C75A6NL08 312 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 CYB561D2O14569 222 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 MAPK13O15264 365 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 LRRN2O75325 713 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 SMC2O95347 1197 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 CYP11A1P05108 521 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 ODC1P11926 461 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 TAF6P49848 677 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 TFAMQ00059 246 aaKnown RBP11.27□□□□□ -0.61
RBBP4-216ENST00000525506 ENPEPQ07075 957 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 PSMD6Q15008 389 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 SV2CQ496J9 727 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 FAM78AQ5JUQ0 283 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 WSCD1Q658N2 575 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 CLEC17AQ6ZS10 378 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 PDZD4Q76G19 769 aaPredicted RBP11.27□□□□□ -0.61
RBBP4-216ENST00000525506 GPIHBP1Q8IV16 184 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 ELMOD1Q8N336 334 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 DTWD2Q8NBA8 298 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 BORCS6Q96GS4 357 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 ZNF512Q96ME7 567 aaPredicted RBP11.27□□□□□ -0.61
RBBP4-216ENST00000525506 RTP3Q9BQQ7 232 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 DNAJC25Q9H1X3 360 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 AVENQ9NQS1 362 aaPredicted RBP11.27□□□□□ -0.61
RBBP4-216ENST00000525506 VPS13AQ96RL7 3174 aa11.27□□□□□ -0.61
RBBP4-216ENST00000525506 ZFHX2Q9C0A1 2572 aaPredicted RBP11.26□□□□□ -0.61
RBBP4-216ENST00000525506 OBSL1O75147 1896 aa11.26□□□□□ -0.61
RBBP4-216ENST00000525506 MTMR11A4FU01 709 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms