RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CEBPBP17676 345 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 TNNI1P19237 187 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 CCR2P41597 374 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 SNRPFP62306 86 aaKnown RBP13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 CYP24A1Q07973 514 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 DPYDQ12882 1025 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 HTR4Q13639 388 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 DUOXA2Q1HG44 320 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 CENPPQ6IPU0 288 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 POTEHQ6S545 545 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 LRRTM3Q86VH5 581 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 NPAS3Q8IXF0 933 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 ELMOD1Q8N336 334 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 PDCL2Q8N4E4 241 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 FBXL6Q8N531 539 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 FGF14Q92915 247 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 FNBP1Q96RU3 617 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 ZCWPW1Q9H0M4 648 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 MAFFQ9ULX9 164 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 L1RE1Q9UN81 338 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 MAPK8IP1Q9UQF2 711 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 R3HCC1Q9Y3T6 440 aaKnown RBP13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 SNX9Q9Y5X1 595 aa13.83□□□□□ -0.2
TRAPPC4-205ENST00000525079 ANHXE9PGG2 379 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 HCRTO43612 131 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 HUS1O60921 280 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 CST3P01034 146 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 MYL1P05976 194 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 CFHP08603 1231 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 GJA1P17302 382 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 ALDH1A3P47895 512 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 CASP4P49662 377 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 PSMD6Q15008 389 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 PRSS36Q5K4E3 855 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 CYP4A22Q5TCH4 519 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 IQCEQ6IPM2 695 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 PDZD4Q76G19 769 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 TRAPPC11Q7Z392 1133 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 OSTM1Q86WC4 334 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 WDR49Q8IV35 697 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 SUGP1Q8IWZ8 645 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 C12orf56Q8IXR9 622 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 LRRC52Q8N7C0 313 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 ZNF516Q92618 1163 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 CCDC47Q96A33 483 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 HPDLQ96IR7 371 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 CGRRF1Q99675 332 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 SEPT5Q99719 369 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 KCTD10Q9H3F6 313 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 CGNQ9P2M7 1197 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 FBXL21Q9UKT6 434 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 DUSP12Q9UNI6 340 aa13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 ZFP37Q9Y6Q3 630 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-205ENST00000525079 TRIOO75962 3097 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 RHOBTB3O94955 611 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 ACAT1P24752 427 aaKnown RBP13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 EPHB3P54753 998 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 VCPP55072 806 aaKnown RBP13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 MYO1EQ12965 1108 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 PNOCQ13519 176 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 MGAT5BQ3V5L5 792 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 FMR1NBQ8N0W7 255 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 GOLGA5Q8TBA6 731 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 PLEKHO2Q8TD55 490 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 NXPE3Q969Y0 559 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 KXD1Q9BQD3 176 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 DNAJC25Q9H1X3 360 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 AVENQ9NQS1 362 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 TMLHEQ9NVH6 421 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 GDAP2Q9NXN4 497 aa13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 DDX43Q9NXZ2 648 aaKnown RBP13.81□□□□□ -0.2
TRAPPC4-205ENST00000525079 ZNF197O14709 1029 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 MOSPD3O75425 235 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 NR3C1P04150 777 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 PLD1Q13393 1074 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 CCDC142Q17RM4 750 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 SOWAHAQ2M3V2 549 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 IER5LQ5T953 404 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 DCP1BQ8IZD4 617 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 ADGRF2Q8IZF7 708 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 SIX5Q8N196 739 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 FLCNQ8NFG4 579 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 FAM200AQ8TCP9 573 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 GIPC2Q8TF65 315 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 ERCC4Q92889 916 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 ZSWIM3Q96MP5 696 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 LPIN3Q9BQK8 851 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 PLA2G2FQ9BZM2 168 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 MFSD1Q9H3U5 465 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 ASAH2Q9NR71 780 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 DMAC2Q9NW81 257 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 ABI2Q9NYB9 513 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 CA14Q9ULX7 337 aa13.8□□□□□ -0.2
TRAPPC4-205ENST00000525079 PDXKO00764 312 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 CALUO43852 315 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 PHACTR2O75167 634 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 PRPF40AO75400 957 aaKnown RBP13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 SRFP11831 508 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 AVPR2P30518 371 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms