RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 TMEM233B4DJY2 109 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 NT5C1B-RDH14C9J2C7 533 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 MYO1CO00159 1063 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 DNPH1O43598 174 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 CUTAO60888 179 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 SEC24DO94855 1032 aaPredicted RBP6.03□□□□□ -1.44
USP47-204ENST00000525078 CSF1P09603 554 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 TXNP10599 105 aaKnown RBP6.03□□□□□ -1.44
USP47-204ENST00000525078 EGR1P18146 543 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 APEX1P27695 318 aaKnown RBP6.03□□□□□ -1.44
USP47-204ENST00000525078 MAPK4P31152 587 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 MLH1P40692 756 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 PAFAH1B1P43034 410 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 PHKA1P46020 1223 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 NOMO3P69849 1222 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 MC1RQ01726 317 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 CREB5Q02930 508 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 NFATC3Q12968 1075 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 PRPF4BQ13523 1007 aaKnown RBP6.03□□□□□ -1.44
USP47-204ENST00000525078 SCARB2Q14108 478 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 DCTN1Q14203 1278 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 RPS6KA2Q15349 733 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 TMEM266Q2M3C6 531 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 DNAJC21Q5F1R6 531 aaKnown RBP6.03□□□□□ -1.44
USP47-204ENST00000525078 EMC10Q5UCC4 262 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 RPUSD3Q6P087 351 aaKnown RBP6.03□□□□□ -1.44
USP47-204ENST00000525078 SLC22A25Q6T423 547 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 KLHL24Q6TFL4 600 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 CRTC1Q6UUV9 634 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 LRSAM1Q6UWE0 723 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 ATF7IPQ6VMQ6 1270 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 MFSD6Q6ZSS7 791 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 TMPRSS7Q7RTY8 843 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 THAP5Q7Z6K1 395 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 TAGAPQ8N103 731 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 DCBLD1Q8N8Z6 715 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 ARRDC4Q8NCT1 418 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 TOR1AIP2Q8NFQ8 470 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 OR56A3Q8NH54 315 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 CPT1CQ8TCG5 803 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 CREB3L4Q8TEY5 395 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 CCDC47Q96A33 483 aaKnown RBP6.03□□□□□ -1.44
USP47-204ENST00000525078 TBC1D32Q96NH3 1257 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 TSPAN18Q96SJ8 248 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 REEP2Q9BRK0 252 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 DESI2Q9BSY9 194 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 ABHD16BQ9H3Z7 469 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 RNPEPQ9H4A4 650 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 EPS8L2Q9H6S3 715 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 MKNK2Q9HBH9 465 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 SLC39A2Q9NP94 309 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 SEPT11Q9NVA2 429 aaKnown RBP6.03□□□□□ -1.44
USP47-204ENST00000525078 USP40Q9NVE5 1235 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 IMPACTQ9P2X3 320 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 MTRRQ9UBK8 725 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 LPAR3Q9UBY5 353 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 MID2Q9UJV3 735 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 TMCC3Q9ULS5 477 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 SIT1Q9Y3P8 196 aa6.03□□□□□ -1.44
USP47-204ENST00000525078 FADS2P1A8MWK0 482 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.02□□□□□ -1.45
USP47-204ENST00000525078 E7EVH7 732 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 RAB27BO00194 218 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 KIAA0355O15063 1070 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 FYB1O15117 783 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 ADRB2P07550 413 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 GNAI3P08754 354 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 DDCP20711 480 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 PSMA3P25788 255 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 AFF3P51826 1226 aaKnown RBP6.02□□□□□ -1.45
USP47-204ENST00000525078 ZNF131P52739 623 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 GNAI1P63096 354 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 MEF2AQ02078 507 aaPredicted RBP6.02□□□□□ -1.45
USP47-204ENST00000525078 MPP3Q13368 585 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 ACVR2BQ13705 512 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 TMTC4Q5T4D3 741 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 DCAF12L1Q5VU92 463 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 GPR139Q6DWJ6 353 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 NAA16Q6N069 864 aaPredicted RBP6.02□□□□□ -1.45
USP47-204ENST00000525078 USP17L6PQ6QN14 398 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 SHISA2Q6UWI4 295 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 Q6ZVL8 140 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 RAB11FIP2Q7L804 512 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 BMP8AQ7Z5Y6 402 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 CCDC91Q7Z6B0 441 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.02□□□□□ -1.45
USP47-204ENST00000525078 SLCO6A1Q86UG4 719 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 DIS3L2Q8IYB7 885 aaKnown RBP6.02□□□□□ -1.45
USP47-204ENST00000525078 ZGPATQ8N5A5 531 aaKnown RBP6.02□□□□□ -1.45
USP47-204ENST00000525078 SRBD1Q8N5C6 995 aaKnown RBP6.02□□□□□ -1.45
USP47-204ENST00000525078 SLC15A4Q8N697 577 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 DNAJC5GQ8N7S2 189 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 ZNF384Q8TF68 577 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 TBC1D5Q92609 795 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 SNX21Q969T3 373 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 HIC2Q96JB3 615 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 MAP6Q96JE9 813 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 HHIPL1Q96JK4 782 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 FEM1CQ96JP0 617 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 UBL7Q96S82 380 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms