RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 DNAJC25Q9H1X3 360 aa12.81□□□□□ -0.36
SPARC-206ENST00000524277 EPC1Q9H2F5 836 aa12.81□□□□□ -0.36
SPARC-206ENST00000524277 ATXN3LQ9H3M9 355 aa12.81□□□□□ -0.36
SPARC-206ENST00000524277 DPP3Q9NY33 737 aa12.81□□□□□ -0.36
SPARC-206ENST00000524277 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
SPARC-206ENST00000524277 SRPRBQ9Y5M8 271 aaKnown RBP12.81□□□□□ -0.36
SPARC-206ENST00000524277 PIAS3Q9Y6X2 628 aa12.81□□□□□ -0.36
SPARC-206ENST00000524277 MORC2Q9Y6X9 1032 aaPredicted RBP12.81□□□□□ -0.36
SPARC-206ENST00000524277 CACNA1AO00555 2505 aa12.81□□□□□ -0.36
SPARC-206ENST00000524277 SHISA7A6NL88 538 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 SOBPA7XYQ1 873 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 ANKRD63C9JTQ0 380 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 CYB561D2O14569 222 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 NFICP08651 508 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 OR4Q2P0C623 313 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 ACOT2P49753 483 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 GUCY2FP51841 1108 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 MTAPQ13126 283 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 PTPAQ15257 358 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 TAF12Q16514 161 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 ARHGAP29Q52LW3 1261 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 DGKKQ5KSL6 1271 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 RRAGBQ5VZM2 374 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 ARID3BQ8IVW6 561 aaPredicted RBP12.8□□□□□ -0.36
SPARC-206ENST00000524277 KIAA2013Q8IYS2 634 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 DCP1BQ8IZD4 617 aaKnown RBP12.8□□□□□ -0.36
SPARC-206ENST00000524277 CELF5Q8N6W0 485 aaKnown RBP12.8□□□□□ -0.36
SPARC-206ENST00000524277 LRRC15Q8TF66 581 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 CACTINQ8WUQ7 758 aaKnown RBP12.8□□□□□ -0.36
SPARC-206ENST00000524277 POMGNT1Q8WZA1 660 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 ZNF560Q96MR9 790 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 GCNAQ96QF7 691 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 ACCSQ96QU6 501 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 ZCWPW1Q9H0M4 648 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 LMAN1LQ9HAT1 526 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 NCDNQ9UBB6 729 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 NDRG2Q9UN36 371 aaKnown RBP12.8□□□□□ -0.36
SPARC-206ENST00000524277 SLC27A5Q9Y2P5 690 aa12.8□□□□□ -0.36
SPARC-206ENST00000524277 VPS37CA5D8V6 355 aaPredicted RBP12.79□□□□□ -0.36
SPARC-206ENST00000524277 ARNTLO00327 626 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 PPEF2O14830 753 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 GJA1P17302 382 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 DDX6P26196 483 aaKnown RBP eCLIP12.79□□□□□ -0.36
SPARC-206ENST00000524277 GABRR2P28476 465 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 GRIN1Q05586 938 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 SV2CQ496J9 727 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 SLC39A12Q504Y0 691 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 ZC2HC1CQ53FD0 456 aaPredicted RBP12.79□□□□□ -0.36
SPARC-206ENST00000524277 CCDC73Q6ZRK6 1079 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 RALGPS2Q86X27 583 aaPredicted RBP12.79□□□□□ -0.36
SPARC-206ENST00000524277 SYNPOQ8N3V7 929 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 SPEM1Q8N4L4 309 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 SPATA18Q8TC71 538 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 FAM200AQ8TCP9 573 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 EPSTI1Q96J88 318 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 STRA6Q9BX79 667 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 CRISPLD1Q9H336 500 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 TASP1Q9H6P5 420 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 MRPL44Q9H9J2 332 aaKnown RBP12.79□□□□□ -0.36
SPARC-206ENST00000524277 OLFML3Q9NRN5 406 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 THG1LQ9NWX6 298 aaKnown RBP12.79□□□□□ -0.36
SPARC-206ENST00000524277 RAB23Q9ULC3 237 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 GPR179Q6PRD1 2367 aa12.79□□□□□ -0.36
SPARC-206ENST00000524277 MYBPHLA2RUH7 354 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 KPNA7A9QM74 516 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 PRR5-ARHGAP8B1AHC4 643 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 KIAA0391O15091 583 aaKnown RBP12.78□□□□□ -0.36
SPARC-206ENST00000524277 PPP1R37O75864 691 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 PAPSS2O95340 614 aaPredicted RBP12.78□□□□□ -0.36
SPARC-206ENST00000524277 CHRNB1P11230 501 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 GARTP22102 1010 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 CCNE1P24864 410 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 CNR2P34972 360 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 CXCL12P48061 93 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 KPNA1P52294 538 aaPredicted RBP12.78□□□□□ -0.36
SPARC-206ENST00000524277 ARHGAP8P85298 464 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 TSPY1Q01534 308 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 NFE2Q16621 373 aaPredicted RBP12.78□□□□□ -0.36
SPARC-206ENST00000524277 MGAT5BQ3V5L5 792 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 L1TD1Q5T7N2 865 aaKnown RBP12.78□□□□□ -0.36
SPARC-206ENST00000524277 GPR158Q5T848 1215 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 GAREM2Q75VX8 874 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 DYMQ7RTS9 669 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 DGLUCYQ7Z3D6 616 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 SFR1Q86XK3 245 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 OR10T2Q8NGX3 314 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 RMDN1Q96DB5 314 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 SEPT5Q99719 369 aaPredicted RBP12.78□□□□□ -0.36
SPARC-206ENST00000524277 PYM1Q9BRP8 204 aaKnown RBP12.78□□□□□ -0.36
SPARC-206ENST00000524277 LRRC27Q9C0I9 530 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 TMEM206Q9H813 350 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 DLL3Q9NYJ7 618 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 GMEB2Q9UKD1 530 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 SMG5Q9UPR3 1016 aaKnown RBP12.78□□□□□ -0.36
SPARC-206ENST00000524277 CLIC4Q9Y696 253 aa12.78□□□□□ -0.36
SPARC-206ENST00000524277 FRYLO94915 3013 aa12.77□□□□□ -0.36
SPARC-206ENST00000524277 CEP250Q9BV73 2442 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 NRG2O14511 850 aaPredicted RBP12.77□□□□□ -0.37
SPARC-206ENST00000524277 HAPLN1P10915 354 aaPredicted RBP12.77□□□□□ -0.37
SPARC-206ENST00000524277 ADSSP30520 456 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms