RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 XPR1Q9UBH6 696 aa4.75□□□□□ -1.65
SKP1-212ENST00000523966 RAPGEFL1Q9UHV5 662 aa4.75□□□□□ -1.65
SKP1-212ENST00000523966 HDAC9Q9UKV0 1011 aa4.75□□□□□ -1.65
SKP1-212ENST00000523966 LRCH1Q9Y2L9 728 aa4.75□□□□□ -1.65
SKP1-212ENST00000523966 RAD54BQ9Y620 910 aa4.75□□□□□ -1.65
SKP1-212ENST00000523966 ADAMTS20P59510 1910 aa4.75□□□□□ -1.65
SKP1-212ENST00000523966 CCDC195A0A1B0GUA6 201 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 TRIM43BA6NCK2 446 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 PYCARD-AS1I3L0S3 204 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 RNASET2O00584 256 aaKnown RBP4.74□□□□□ -1.65
SKP1-212ENST00000523966 APOL1O14791 398 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 PRSS23O95084 383 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 FCER1AP12319 257 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 FGFR4P22455 802 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 TNFSF4P23510 183 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 ACRV1P26436 265 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 TM4SF4P48230 202 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 SLC11A2P49281 568 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 CASP5P51878 434 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 RPS16P62249 146 aaKnown RBP4.74□□□□□ -1.65
SKP1-212ENST00000523966 HSD11B2P80365 405 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 FPGSQ05932 587 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 FZD5Q13467 585 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 IQCB1Q15051 598 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 RABL3Q5HYI8 236 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 GORABQ5T7V8 394 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 C1QL3Q5VWW1 255 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 TAPT1Q6NXT6 567 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 TOGARAM2Q6ZUX3 1019 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 HTR3DQ70Z44 454 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 RNF44Q7L0R7 432 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 BEND5Q7L4P6 421 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 MAPKAPK5Q8IW41 473 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 ZFPM1Q8IX07 1006 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 YAF2Q8IY57 180 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 ATP11CQ8NB49 1132 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 TRIM43Q96BQ3 446 aaPredicted RBP4.74□□□□□ -1.65
SKP1-212ENST00000523966 IQCDQ96DY2 449 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 ZC3H10Q96K80 434 aaKnown RBP4.74□□□□□ -1.65
SKP1-212ENST00000523966 MSLNLQ96KJ4 702 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 C8orf49Q96NF6 230 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 BRIP1Q9BX63 1249 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 TLR10Q9BXR5 811 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 DPH1Q9BZG8 443 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 MS4A7Q9GZW8 240 aaPredicted RBP4.74□□□□□ -1.65
SKP1-212ENST00000523966 MYH16Q9H6N6 1097 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 CD248Q9HCU0 757 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 PLCB1Q9NQ66 1216 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 SHOC2Q9UQ13 582 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 FPGT-TNNI3KV9GXZ4 949 aa4.74□□□□□ -1.65
SKP1-212ENST00000523966 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 MBD3L4A6NDZ8 208 aaPredicted RBP4.73□□□□□ -1.65
SKP1-212ENST00000523966 MBD3L3A6NE82 208 aaPredicted RBP4.73□□□□□ -1.65
SKP1-212ENST00000523966 PPFIA4O75335 1185 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 DNAJB5O75953 348 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 INMTO95050 263 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 ATXN1LP0C7T5 689 aaKnown RBP4.73□□□□□ -1.65
SKP1-212ENST00000523966 ITGALP20701 1170 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 KLRC1P26715 233 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 KRT17Q04695 432 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 SLFN5Q08AF3 891 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 ARL13BQ3SXY8 428 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 PDCD4Q53EL6 469 aaKnown RBP4.73□□□□□ -1.65
SKP1-212ENST00000523966 IZUMO3Q5VZ72 239 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 ARMC6Q6NXE6 501 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 CLNKQ7Z7G1 428 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 TMPRSS6Q8IU80 811 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 C1orf210Q8IVY1 113 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 PALM2Q8IXS6 379 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 SPICE1Q8N0Z3 855 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 TXLNBQ8N3L3 684 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 OR2C3Q8N628 320 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 ENAHQ8N8S7 591 aaPredicted RBP4.73□□□□□ -1.65
SKP1-212ENST00000523966 CCDC150Q8NCX0 1101 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 NSUN7Q8NE18 718 aaKnown RBP4.73□□□□□ -1.65
SKP1-212ENST00000523966 DEPTORQ8TB45 409 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 DVL3Q92997 716 aaPredicted RBP4.73□□□□□ -1.65
SKP1-212ENST00000523966 SPSB4Q96A44 273 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 RNF31Q96EP0 1072 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 SNX22Q96L94 193 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 HEPHQ9BQS7 1158 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 ZSWIM1Q9BR11 485 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 SPATA5L1Q9BVQ7 753 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 SLC46A2Q9BY10 475 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 TTYH3Q9C0H2 523 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 VPS11Q9H270 941 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 SMURF2Q9HAU4 748 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 STK32BQ9NY57 414 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 COL20A1Q9P218 1284 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 AGAP1Q9UPQ3 857 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 JAG2Q9Y219 1238 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 AATKQ6ZMQ8 1374 aa4.73□□□□□ -1.65
SKP1-212ENST00000523966 A0A087WWL8 130 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 GAGE12BA1L429 117 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 GAGE12HA6NDE8 117 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 E9PLN8 166 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 ZNF185O15231 689 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 FAM20BO75063 409 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 EIF3JO75822 258 aaKnown RBP4.72□□□□□ -1.65
SKP1-212ENST00000523966 ANXA2P07355 339 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms