RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 CHAMP1Q96JM3 812 aa28.13■■■□□ 2.09
PVT1-219ENST00000523427 SENP8Q96LD8 212 aa28.13■■■□□ 2.09
PVT1-219ENST00000523427 LARSQ9P2J5 1176 aaKnown RBP28.13■■■□□ 2.09
PVT1-219ENST00000523427 ASB3Q9Y575 518 aa28.13■■■□□ 2.09
PVT1-219ENST00000523427 CHD8Q9HCK8 2581 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 HNRNPDLO14979 420 aaKnown RBP28.12■■■□□ 2.09
PVT1-219ENST00000523427 PRAMEF12O95522 483 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 ODC1P11926 461 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 TYMPP19971 482 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 CNR2P34972 360 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 PXNP49023 591 aaPredicted RBP28.12■■■□□ 2.09
PVT1-219ENST00000523427 LILRA4P59901 499 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 CCDC6Q16204 474 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 MGAT5BQ3V5L5 792 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 JADE1Q6IE81 842 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 ITIH5Q86UX2 942 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 GIPC2Q8TF65 315 aa28.12■■■□□ 2.09
PVT1-219ENST00000523427 SH2B1Q9NRF2 756 aaPredicted RBP28.12■■■□□ 2.09
PVT1-219ENST00000523427 TULP1O00294 542 aaPredicted RBP28.11■■■□□ 2.09
PVT1-219ENST00000523427 AXIN1O15169 862 aa28.11■■■□□ 2.09
PVT1-219ENST00000523427 NCKAP1LP55160 1127 aa28.11■■■□□ 2.09
PVT1-219ENST00000523427 TAF12Q16514 161 aa28.11■■■□□ 2.09
PVT1-219ENST00000523427 SLC39A12Q504Y0 691 aa28.11■■■□□ 2.09
PVT1-219ENST00000523427 OR10T2Q8NGX3 314 aa28.11■■■□□ 2.09
PVT1-219ENST00000523427 BPIFB1Q8TDL5 484 aa28.11■■■□□ 2.09
PVT1-219ENST00000523427 MSTO1Q9BUK6 570 aa28.11■■■□□ 2.09
PVT1-219ENST00000523427 MYH11P35749 1972 aa28.11■■■□□ 2.09
PVT1-219ENST00000523427 H0YCG3 227 aa28.1■■■□□ 2.09
PVT1-219ENST00000523427 OGTO15294 1046 aa28.1■■■□□ 2.09
PVT1-219ENST00000523427 EIF5BO60841 1220 aaKnown RBP28.1■■■□□ 2.09
PVT1-219ENST00000523427 VEPH1Q14D04 833 aa28.1■■■□□ 2.09
PVT1-219ENST00000523427 ARSHQ5FYA8 562 aa28.1■■■□□ 2.09
PVT1-219ENST00000523427 HYIQ5T013 277 aa28.1■■■□□ 2.09
PVT1-219ENST00000523427 SPATA1Q5VX52 437 aa28.1■■■□□ 2.09
PVT1-219ENST00000523427 GCNAQ96QF7 691 aa28.1■■■□□ 2.09
PVT1-219ENST00000523427 ZHX3Q9H4I2 956 aa28.1■■■□□ 2.09
PVT1-219ENST00000523427 TASP1Q9H6P5 420 aa28.1■■■□□ 2.09
PVT1-219ENST00000523427 TBX20Q9UMR3 447 aa28.1■■■□□ 2.09
PVT1-219ENST00000523427 MAP1BP46821 2468 aaKnown RBP28.1■■■□□ 2.09
PVT1-219ENST00000523427 RALGAPA1Q6GYQ0 2036 aa28.09■■■□□ 2.09
PVT1-219ENST00000523427 K7ENM7 598 aa28.09■■■□□ 2.09
PVT1-219ENST00000523427 EXTL3O43909 919 aa28.09■■■□□ 2.09
PVT1-219ENST00000523427 FGF19O95750 216 aa28.09■■■□□ 2.09
PVT1-219ENST00000523427 NFICP08651 508 aa28.09■■■□□ 2.09
PVT1-219ENST00000523427 KYAT1Q16773 422 aa28.09■■■□□ 2.09
PVT1-219ENST00000523427 ST3GAL2Q16842 350 aa28.09■■■□□ 2.09
PVT1-219ENST00000523427 MYCT1Q8N699 235 aa28.09■■■□□ 2.09
PVT1-219ENST00000523427 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.09■■■□□ 2.09
PVT1-219ENST00000523427 KMT2BQ9UMN6 2715 aaPredicted RBP28.08■■■□□ 2.09
PVT1-219ENST00000523427 PAPSS2O95340 614 aaPredicted RBP28.08■■■□□ 2.09
PVT1-219ENST00000523427 ATP2C1P98194 919 aaPredicted RBP28.08■■■□□ 2.09
PVT1-219ENST00000523427 CCINQ13939 588 aa28.08■■■□□ 2.09
PVT1-219ENST00000523427 SF3A2Q15428 464 aaKnown RBP28.08■■■□□ 2.09
PVT1-219ENST00000523427 AASDHQ4L235 1098 aaPredicted RBP28.08■■■□□ 2.09
PVT1-219ENST00000523427 C9orf57Q5W0N0 161 aa28.08■■■□□ 2.09
PVT1-219ENST00000523427 PKN3Q6P5Z2 889 aa28.08■■■□□ 2.09
PVT1-219ENST00000523427 GPBP1Q86WP2 473 aa28.08■■■□□ 2.09
PVT1-219ENST00000523427 REEP2Q9BRK0 252 aa28.08■■■□□ 2.09
PVT1-219ENST00000523427 ARRDC1-AS1Q9H2J1 176 aa28.08■■■□□ 2.09
PVT1-219ENST00000523427 GKN1Q9NS71 199 aa28.08■■■□□ 2.09
PVT1-219ENST00000523427 THG1LQ9NWX6 298 aaKnown RBP28.08■■■□□ 2.09
PVT1-219ENST00000523427 KCND2Q9NZV8 630 aa28.08■■■□□ 2.09
PVT1-219ENST00000523427 FAM189A1O60320 539 aa28.07■■■□□ 2.08
PVT1-219ENST00000523427 FAM13AO94988 1023 aa28.07■■■□□ 2.08
PVT1-219ENST00000523427 ATF6P18850 670 aa28.07■■■□□ 2.08
PVT1-219ENST00000523427 TUFMP49411 452 aaKnown RBP28.07■■■□□ 2.08
PVT1-219ENST00000523427 TMEM132DQ14C87 1099 aa28.07■■■□□ 2.08
PVT1-219ENST00000523427 ITPRIPL2Q3MIP1 535 aa28.07■■■□□ 2.08
PVT1-219ENST00000523427 IL31Q6EBC2 164 aa28.07■■■□□ 2.08
PVT1-219ENST00000523427 WDR5BQ86VZ2 330 aa28.07■■■□□ 2.08
PVT1-219ENST00000523427 SLC46A2Q9BY10 475 aa28.07■■■□□ 2.08
PVT1-219ENST00000523427 OBP2AQ9NY56 170 aa28.07■■■□□ 2.08
PVT1-219ENST00000523427 CNOT1A5YKK6 2376 aaKnown RBP28.06■■■□□ 2.08
PVT1-219ENST00000523427 ACOT2P49753 483 aa28.06■■■□□ 2.08
PVT1-219ENST00000523427 PLCB2Q00722 1185 aa28.06■■■□□ 2.08
PVT1-219ENST00000523427 TMEM119Q4V9L6 283 aa28.06■■■□□ 2.08
PVT1-219ENST00000523427 RILPL1Q5EBL4 403 aa28.06■■■□□ 2.08
PVT1-219ENST00000523427 METTL23Q86XA0 190 aa28.06■■■□□ 2.08
PVT1-219ENST00000523427 IL21Q9HBE4 155 aa28.06■■■□□ 2.08
PVT1-219ENST00000523427 CYB561D2O14569 222 aa28.05■■■□□ 2.08
PVT1-219ENST00000523427 KRT18P05783 430 aaKnown RBP28.05■■■□□ 2.08
PVT1-219ENST00000523427 CDC25CP30307 473 aa28.05■■■□□ 2.08
PVT1-219ENST00000523427 NMT1P30419 496 aaKnown RBP28.05■■■□□ 2.08
PVT1-219ENST00000523427 MCM2P49736 904 aa28.05■■■□□ 2.08
PVT1-219ENST00000523427 TRIM68Q6AZZ1 485 aa28.05■■■□□ 2.08
PVT1-219ENST00000523427 C12orf50Q8NA57 414 aaPredicted RBP28.05■■■□□ 2.08
PVT1-219ENST00000523427 PYM1Q9BRP8 204 aaKnown RBP28.05■■■□□ 2.08
PVT1-219ENST00000523427 ZCWPW1Q9H0M4 648 aa28.05■■■□□ 2.08
PVT1-219ENST00000523427 PPP4R2Q9NY27 417 aa28.05■■■□□ 2.08
PVT1-219ENST00000523427 ABI2Q9NYB9 513 aaPredicted RBP28.05■■■□□ 2.08
PVT1-219ENST00000523427 CPSF3Q9UKF6 684 aaKnown RBP28.05■■■□□ 2.08
PVT1-219ENST00000523427 A0A0B4J269 797 aa28.04■■■□□ 2.08
PVT1-219ENST00000523427 SLC39A4Q6P5W5 647 aa28.04■■■□□ 2.08
PVT1-219ENST00000523427 THEM5Q8N1Q8 247 aa28.04■■■□□ 2.08
PVT1-219ENST00000523427 SYNPOQ8N3V7 929 aa28.04■■■□□ 2.08
PVT1-219ENST00000523427 MAB21L3Q8N8X9 362 aa28.04■■■□□ 2.08
PVT1-219ENST00000523427 EBF3Q9H4W6 596 aa28.04■■■□□ 2.08
PVT1-219ENST00000523427 POLR3BQ9NW08 1133 aaPredicted RBP28.04■■■□□ 2.08
PVT1-219ENST00000523427 ODF2LQ9ULJ1 636 aa28.04■■■□□ 2.08
PVT1-219ENST00000523427 PIRO00625 290 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms