RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 PACSIN2Q9UNF0 486 aaPredicted RBP16.45■□□□□ 0.22
CTNNA1-236ENST00000522792 KPNA7A9QM74 516 aa16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 NBNO60934 754 aa16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 SLU7O95391 586 aaKnown RBP16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 PAEPP09466 180 aa16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 LRPAP1P30533 357 aa16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 CENPCQ03188 943 aa16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 SV2CQ496J9 727 aa16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 PAPD7Q5XG87 772 aaKnown RBP16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 PSMB7Q99436 277 aa16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 C11orf70Q9BRQ4 267 aa16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 CDC23Q9UJX2 597 aa16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 MYH10P35580 1976 aa16.44■□□□□ 0.22
CTNNA1-236ENST00000522792 PNPLA4P41247 253 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 SOWAHAQ2M3V2 549 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 LLGL2Q6P1M3 1020 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 DENND1BQ6P3S1 775 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 RHOT2Q8IXI1 618 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 MCOLN2Q8IZK6 566 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 LRRC57Q8N9N7 239 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 C1orf131Q8NDD1 294 aaKnown RBP16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 HEXIM2Q96MH2 286 aaKnown RBP16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 TSPYL2Q9H2G4 693 aaPredicted RBP16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 CNOT8Q9UFF9 292 aaKnown RBP16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 NME7Q9Y5B8 376 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 SAR1BQ9Y6B6 198 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 CASTOR2A6NHX0 329 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 HCRTO43612 131 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 BUB1BO60566 1050 aaPredicted RBP16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 CYP1A2P05177 515 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 SKIP12755 728 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 CLCNKBP51801 687 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 LILRA4P59901 499 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 GPNMBQ14956 572 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 TRIM60Q495X7 471 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 MMS22LQ6ZRQ5 1243 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 DAAM2Q86T65 1068 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 OR6B3Q8NGW1 331 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 NUP85Q9BW27 656 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 NT5C1AQ9BXI3 368 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 TLR10Q9BXR5 811 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 PPP1R12CQ9BZL4 782 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 GTF3C4Q9UKN8 822 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 HYOU1Q9Y4L1 999 aa16.43■□□□□ 0.22
CTNNA1-236ENST00000522792 C9IYK1 514 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 ZNF185O15231 689 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 MED7O43513 233 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 RRM1P23921 792 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 MEI1Q5TIA1 1274 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 MON1BQ7L1V2 547 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 ZNF598Q86UK7 904 aaKnown RBP16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 SCLYQ96I15 445 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 CAPZA3Q96KX2 299 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 PAAF1Q9BRP4 392 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 SNX12Q9UMY4 172 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 PCDHGC3Q9UN70 934 aa16.42■□□□□ 0.22
CTNNA1-236ENST00000522792 TMEM110-MUSTN1A8MSY1 372 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 PITPNM1O00562 1244 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 PODXLO00592 558 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 CXCR5P32302 372 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 TERF1P54274 439 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 CCL23P55773 120 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 SLC24A5Q71RS6 500 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 ACOT1Q86TX2 421 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 TTC39CQ8N584 583 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 WDTC1Q8N5D0 677 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 TMEM35BQ8NCS4 154 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 MNS1Q8NEH6 495 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 DBF4BQ8NFT6 615 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 KBTBD7Q8WVZ9 684 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 TSC1Q92574 1164 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 BTBD6Q96KE9 485 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 GDAP2Q9NXN4 497 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 ADAM22Q9P0K1 906 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 L1RE1Q9UN81 338 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 V9GYY5 206 aaPredicted RBP16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 MICAL2O94851 1124 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 LSM8O95777 96 aaKnown RBP16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 FGFR1P11362 822 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 VDRP11473 427 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 TLE2Q04725 743 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 FAAP100Q0VG06 881 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 SGO2Q562F6 1265 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 ANKRD33Q7Z3H0 272 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 PHF13Q86YI8 300 aaPredicted RBP16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 C12orf29Q8N999 325 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 APPL2Q8NEU8 664 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 ZNF564Q8TBZ8 553 aaPredicted RBP16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 LPIN3Q9BQK8 851 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 HIPK3Q9H422 1215 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 DPEP3Q9H4B8 488 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 UBN1Q9NPG3 1134 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 CEP83Q9Y592 693 aa16.41■□□□□ 0.22
CTNNA1-236ENST00000522792 A8MXQ7 604 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 DCDC2CA8MYV0 355 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 HUS1O60921 280 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 PDGFRBP09619 1106 aa16.4■□□□□ 0.22
CTNNA1-236ENST00000522792 TCTN1Q2MV58 587 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms