RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 GALNT7Q86SF2 657 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 ARHGEF25Q86VW2 580 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 RAB11FIP4Q86YS3 637 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 DIS3L2Q8IYB7 885 aaKnown RBP4.43□□□□□ -1.7
SKP1-209ENST00000522552 SMG8Q8ND04 991 aaKnown RBP4.43□□□□□ -1.7
SKP1-209ENST00000522552 Q8NFD4 153 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 USP6NLQ92738 828 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 DCAF5Q96JK2 942 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 NOX5Q96PH1 765 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 GBP4Q96PP9 640 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 FNBP1Q96RU3 617 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 USP44Q9H0E7 712 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 CHST8Q9H2A9 424 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 MKNK2Q9HBH9 465 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 ERVK-5Q9HDB9 667 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 RBM12Q9NTZ6 932 aaKnown RBP4.43□□□□□ -1.7
SKP1-209ENST00000522552 MARCH2Q9P0N8 246 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 AGTPBP1Q9UPW5 1226 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 NAALADL1Q9UQQ1 740 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 MTF2Q9Y483 593 aaPredicted RBP4.43□□□□□ -1.7
SKP1-209ENST00000522552 X6R8D5 127 aa4.43□□□□□ -1.7
SKP1-209ENST00000522552 MEGF11A6BM72 1044 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 PTGES3LE9PB15 166 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 F8W031 263 aaPredicted RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 BTN3A1O00481 513 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 MPHOSPH10O00566 681 aaKnown RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 VILLO15195 856 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 SRGAP2O75044 1071 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 TIAF1O95411 115 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 AHSGP02765 367 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 TUBB4AP04350 444 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 CLEC3BP05452 202 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 ATP5BP06576 529 aaKnown RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 SYPP08247 313 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 CNPP09543 421 aaKnown RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 HSPA1AP0DMV8 641 aaKnown RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 HSPA1BP0DMV9 641 aaKnown RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 MALP21145 153 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 RGS2P41220 211 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 EPHA5P54756 1037 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 SLC6A3Q01959 620 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 BFSP1Q12934 665 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 TRIM29Q14134 588 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 PPA1Q15181 289 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 E2F5Q15329 346 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 GPR68Q15743 365 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 TBCCQ15814 346 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 MAN2A1Q16706 1144 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 C5orf22Q49AR2 442 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 BTBD8Q5XKL5 378 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 SLFN12LQ6IEE8 588 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 SP8Q8IXZ3 490 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 TAGAPQ8N103 731 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 GALNT4Q8N4A0 578 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 TRIML1Q8N9V2 468 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 C2CD4AQ8NCU7 369 aaPredicted RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 CCDC150Q8NCX0 1101 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 NLGN2Q8NFZ4 835 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 MOSPD2Q8NHP6 518 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.42□□□□□ -1.75e-16■□□□□ 9.1
SKP1-209ENST00000522552 GAB3Q8WWW8 586 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 CFHR4Q92496 578 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 TBC1D5Q92609 795 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 CUL5Q93034 780 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 ZNF764Q96H86 408 aaPredicted RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 SNX27Q96L92 541 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 TRAPPC9Q96Q05 1148 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 HGH1Q9BTY7 390 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 PDCL3Q9H2J4 239 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 RABEP2Q9H5N1 569 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 WDCPQ9H6R7 721 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 TBC1D14Q9P2M4 693 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 ZNF212Q9UDV6 495 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 SRRDQ9UH36 339 aa4.42□□□□□ -1.7
SKP1-209ENST00000522552 CHORDC1Q9UHD1 332 aaPredicted RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 SMG5Q9UPR3 1016 aaKnown RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 COA3Q9Y2R0 106 aaPredicted RBP4.42□□□□□ -1.7
SKP1-209ENST00000522552 C22orf46C9J442 243 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 KRIT1O00522 736 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 SH2B2O14492 632 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 TBC1D4O60343 1298 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 DEAF1O75398 565 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 KRT38O76015 456 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 ENDOD1O94919 500 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 WISP1O95388 367 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 CBX7O95931 251 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 QDPRP09417 244 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 KRT10P13645 584 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 ALDH3A2P51648 485 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 BCAT1P54687 386 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 TPD52P55327 224 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 SOX8P57073 446 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 EVCP57679 992 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 IL1RL1Q01638 556 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 TLE1Q04724 770 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 SCAPQ12770 1279 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 TFCP2Q12800 502 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 EPS8Q12929 822 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 MPP3Q13368 585 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 PRPF4BQ13523 1007 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms