RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 CACNA2D4Q7Z3S7 1137 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 METTL23Q86XA0 190 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 FBXO22Q8NEZ5 403 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 CPLX3Q8WVH0 158 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 ARNTL2Q8WYA1 636 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 SHC3Q92529 594 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 HERC2P3Q9BVR0 1158 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 STK33Q9BYT3 514 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 GPR88Q9GZN0 384 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 CHD7Q9P2D1 2997 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 HMGXB4Q9UGU5 601 aa17.39■□□□□ 0.37
LSM1-204ENST00000522515 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.39■□□□□ 0.37
LSM1-204ENST00000522515 H3BNC9 293 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 GRM6O15303 877 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 FAM163BP0C2L3 166 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 PNMA6AP0CW24 399 aaPredicted RBP17.38■□□□□ 0.37
LSM1-204ENST00000522515 DNAJB1P25685 340 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 LMO2P25791 158 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 CDC25BP30305 580 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 JAM2P57087 298 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 YWHAHQ04917 246 aaPredicted RBP17.38■□□□□ 0.37
LSM1-204ENST00000522515 INCA1Q0VD86 236 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 OVOS1Q6IE37 1185 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 OR6B3Q8NGW1 331 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 WHAMMQ8TF30 809 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 BAP1Q92560 729 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 JAKMIP2Q96AA8 810 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 TWNKQ96RR1 684 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 RTP3Q9BQQ7 232 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 ZBP1Q9H171 429 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 DDX43Q9NXZ2 648 aaKnown RBP17.38■□□□□ 0.37
LSM1-204ENST00000522515 PUF60Q9UHX1 559 aaKnown RBP17.38■□□□□ 0.37
LSM1-204ENST00000522515 BARX2Q9UMQ3 279 aaPredicted RBP17.38■□□□□ 0.37
LSM1-204ENST00000522515 LZTS1Q9Y250 596 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 DAAM1Q9Y4D1 1078 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 PCDHB4Q9Y5E5 795 aa17.38■□□□□ 0.37
LSM1-204ENST00000522515 FOXN3O00409 490 aaPredicted RBP17.37■□□□□ 0.37
LSM1-204ENST00000522515 CILPO75339 1184 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 OAZ2O95190 189 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 CASP14P31944 242 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 GNL1P36915 607 aaPredicted RBP17.37■□□□□ 0.37
LSM1-204ENST00000522515 LHX1P48742 406 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 FXR1P51114 621 aaKnown RBP eCLIP17.37■□□□□ 0.37
LSM1-204ENST00000522515 NDST1P52848 882 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 YWHAEP62258 255 aaKnown RBP17.37■□□□□ 0.37
LSM1-204ENST00000522515 DSG1Q02413 1049 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 ORC1Q13415 861 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 GPM6BQ13491 265 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 MRPL58Q14197 206 aaKnown RBP17.37■□□□□ 0.37
LSM1-204ENST00000522515 ZNF394Q53GI3 561 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 KIAA0319Q5VV43 1072 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 KIAA1841Q6NSI8 718 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 PRSS55Q6UWB4 352 aaPredicted RBP17.37■□□□□ 0.37
LSM1-204ENST00000522515 SPATA18Q8TC71 538 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 POF1BQ8WVV4 589 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 AUTS2Q8WXX7 1259 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 RIN2Q8WYP3 895 aaPredicted RBP17.37■□□□□ 0.37
LSM1-204ENST00000522515 EDEM3Q9BZQ6 932 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 SNX25Q9H3E2 840 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 STK39Q9UEW8 545 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 CAPN11Q9UMQ6 739 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 STXBP5LQ9Y2K9 1186 aa17.37■□□□□ 0.37
LSM1-204ENST00000522515 A0A1W2PQJ5 194 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 EPOPA6NHQ4 379 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 A8MXQ7 604 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 F8VZ95 297 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 C2CD2LO14523 706 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 PDGFRBP09619 1106 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 ACAT1P24752 427 aaKnown RBP17.36■□□□□ 0.37
LSM1-204ENST00000522515 GLUD2P49448 558 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 ERVFC1P60507 584 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 UBE3AQ05086 875 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 TBX2Q13207 712 aaPredicted RBP17.36■□□□□ 0.37
LSM1-204ENST00000522515 CAMK1Q14012 370 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 TMEM270Q6UE05 265 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.36■□□□□ 0.37
LSM1-204ENST00000522515 DRC7Q8IY82 874 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 LNX1Q8TBB1 728 aaPredicted RBP17.36■□□□□ 0.37
LSM1-204ENST00000522515 PIK3R5Q8WYR1 880 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 IQCDQ96DY2 449 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 SPAG5Q96R06 1193 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 FAM124BQ9H5Z6 455 aaPredicted RBP17.36■□□□□ 0.37
LSM1-204ENST00000522515 CNTN6Q9UQ52 1028 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 TRIOBPQ9H2D6 2365 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 SOX1O00570 391 aaPredicted RBP17.36■□□□□ 0.37
LSM1-204ENST00000522515 CSPG5O95196 566 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 URODP06132 367 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 CTSAP10619 480 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 KRT5P13647 590 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 USP8P40818 1118 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 RAD23BP54727 409 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 TRIM14Q14142 442 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 ANKS3Q6ZW76 656 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 TMC7Q7Z402 723 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 PPFIBP1Q86W92 1011 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 UNC93AQ86WB7 457 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 THEM5Q8N1Q8 247 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 TTC39CQ8N584 583 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
LSM1-204ENST00000522515 RBBP8NLQ8NC74 664 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms