RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 GPR88Q9GZN0 384 aa13.23□□□□□ -0.29
PABPC1-219ENST00000522387 PLCB1Q9NQ66 1216 aa13.23□□□□□ -0.29
PABPC1-219ENST00000522387 CISHQ9NSE2 258 aa13.23□□□□□ -0.29
PABPC1-219ENST00000522387 MARCH5Q9NX47 278 aa13.23□□□□□ -0.29
PABPC1-219ENST00000522387 CEP72Q9P209 647 aa13.23□□□□□ -0.29
PABPC1-219ENST00000522387 PUF60Q9UHX1 559 aaKnown RBP13.23□□□□□ -0.29
PABPC1-219ENST00000522387 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
PABPC1-219ENST00000522387 PCDHB4Q9Y5E5 795 aa13.23□□□□□ -0.29
PABPC1-219ENST00000522387 PMM2O15305 246 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 INPPL1O15357 1258 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 PLEKP08567 350 aaPredicted RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 TKTP29401 623 aaKnown RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 RPL9P32969 192 aaKnown RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 MFAP3P55082 362 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 SV2CQ496J9 727 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 DCLRE1AQ6PJP8 1040 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 SYT10Q6XYQ8 523 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 LRRC52Q8N7C0 313 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 BAP1Q92560 729 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 TWNKQ96RR1 684 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 C17orf80Q9BSJ5 609 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 DESI2Q9BSY9 194 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 NAA15Q9BXJ9 866 aaKnown RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 L2HGDHQ9H9P8 463 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 ALG13Q9NP73 1137 aaKnown RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 ITIH6Q6UXX5 1313 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 AKR1B15C9JRZ8 316 aaPredicted RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 F8VZ95 297 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 TPM1P09493 284 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 ATICP31939 592 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 PSMC1P62191 440 aaKnown RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 MLLT1Q03111 559 aaPredicted RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 SLC47A2Q86VL8 602 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 C12orf29Q8N999 325 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 AUTS2Q8WXX7 1259 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 RSPH1Q8WYR4 309 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 DDX27Q96GQ7 796 aaKnown RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 BAG1Q99933 345 aaPredicted RBP13.22□□□□□ -0.29
PABPC1-219ENST00000522387 DPEP3Q9H4B8 488 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 CAPN11Q9UMQ6 739 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 NME7Q9Y5B8 376 aa13.22□□□□□ -0.29
PABPC1-219ENST00000522387 ATP2C2O75185 946 aa13.21□□□□□ -0.29
PABPC1-219ENST00000522387 PNPLA4P41247 253 aa13.21□□□□□ -0.29
PABPC1-219ENST00000522387 HTRA4P83105 476 aaPredicted RBP13.21□□□□□ -0.29
PABPC1-219ENST00000522387 RASIP1Q5U651 963 aa13.21□□□□□ -0.29
PABPC1-219ENST00000522387 TAF3Q5VWG9 929 aa13.21□□□□□ -0.29
PABPC1-219ENST00000522387 TOGARAM2Q6ZUX3 1019 aa13.21□□□□□ -0.29
PABPC1-219ENST00000522387 ADGRF2Q8IZF7 708 aa13.21□□□□□ -0.29
PABPC1-219ENST00000522387 NUP58Q9BVL2 599 aa13.21□□□□□ -0.29
PABPC1-219ENST00000522387 PBX4Q9BYU1 374 aa13.21□□□□□ -0.29
PABPC1-219ENST00000522387 YBX2Q9Y2T7 364 aaKnown RBP13.21□□□□□ -0.29
PABPC1-219ENST00000522387 A0A0U1RQJ8 604 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 SOWAHDA6NJG2 315 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 MFAP3LO75121 409 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 NDST1P52848 882 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 GCNT1Q02742 428 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 DNAAF5Q86Y56 855 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 COLGALT1Q8NBJ5 622 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 KBTBD7Q8WVZ9 684 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 ATRIPQ8WXE1 791 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 TMEM169Q96HH4 297 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 ZNF558Q96NG5 402 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 STK33Q9BYT3 514 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 ABHD10Q9NUJ1 306 aa13.21□□□□□ -0.3
PABPC1-219ENST00000522387 GBF1Q92538 1859 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 A0A0C4DFX4 3053 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 LINC01553A4QN01 128 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 A8MXQ7 604 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 TUBB4AP04350 444 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 OR4Q2P0C623 313 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 P4HA1P13674 534 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 RPL17P18621 184 aaKnown RBP13.2□□□□□ -0.3
PABPC1-219ENST00000522387 CTNNB1P35222 781 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 ARPP19P56211 112 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 TDRD12Q587J7 1177 aaKnown RBP13.2□□□□□ -0.3
PABPC1-219ENST00000522387 RTP2Q5QGT7 225 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 FUT10Q6P4F1 479 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 CMTR2Q8IYT2 770 aaKnown RBP13.2□□□□□ -0.3
PABPC1-219ENST00000522387 TDHQ8IZJ6 230 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 KLHL23Q8NBE8 558 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 PHOSPHO2Q8TCD6 241 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 IGSF21Q96ID5 467 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 UROC1Q96N76 676 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 TSPAN18Q96SJ8 248 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 TMEM209Q96SK2 561 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 CHP1Q99653 195 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 COLEC11Q9BWP8 271 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 FAM49BQ9NUQ9 324 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 DDX43Q9NXZ2 648 aaKnown RBP13.2□□□□□ -0.3
PABPC1-219ENST00000522387 FAM53CQ9NYF3 392 aa13.2□□□□□ -0.3
PABPC1-219ENST00000522387 LINC00271P0C7V0 271 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 CD19P15391 556 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 ACO1P21399 889 aaKnown RBP13.19□□□□□ -0.3
PABPC1-219ENST00000522387 TBXAS1P24557 533 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-219ENST00000522387 GNL1P36915 607 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-219ENST00000522387 JAM2P57087 298 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 ZBED6P86452 979 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 ERCC6LQ2NKX8 1250 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 244.3 ms