RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 SEPT8Q92599 483 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 PAWRQ96IZ0 340 aaKnown RBP10.18□□□□□ -0.78
SHPRH-209ENST00000521977 C16orf45Q96MC5 204 aaPredicted RBP10.18□□□□□ -0.78
SHPRH-209ENST00000521977 ZNF560Q96MR9 790 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 RPS6KC1Q96S38 1066 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 GAD1Q99259 594 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 TSGA10Q9BZW7 698 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 ISCUQ9H1K1 167 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 SMYD3Q9H7B4 428 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 GOLGA2P5Q9HBQ8 144 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 ACP6Q9NPH0 428 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 GDAP2Q9NXN4 497 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 NXF1Q9UBU9 619 aaKnown RBP10.18□□□□□ -0.78
SHPRH-209ENST00000521977 INTUQ9ULD6 942 aa10.18□□□□□ -0.78
SHPRH-209ENST00000521977 R3HCC1Q9Y3T6 440 aaKnown RBP10.18□□□□□ -0.78
SHPRH-209ENST00000521977 SCN5AQ14524 2016 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 ENPP3O14638 875 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 SPTLC1O15269 473 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 KRT86O43790 486 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 CILPO75339 1184 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 MMEP08473 750 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 PAEPP09466 180 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 CLTBP09497 229 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 WEE2P0C1S8 567 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 FAM163BP0C2L3 166 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 GZMAP12544 262 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 TNNT1P13805 278 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 SCNN1GP51170 649 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 CDH8P55286 799 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 TNNC1P63316 161 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 GRIK3Q13003 919 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 ARHGAP29Q52LW3 1261 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 SCARA5Q6ZMJ2 495 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 NECAB2Q7Z6G3 386 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 KIAA1328Q86T90 577 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 PALB2Q86YC2 1186 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 CRIPAKQ8N1N5 446 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 TET1Q8NFU7 2136 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 VWCEQ96DN2 955 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 SCLYQ96I15 445 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 PCDHB18PQ96TA0 734 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 MCOLN1Q9GZU1 580 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 LUC7LQ9NQ29 371 aaKnown RBP10.17□□□□□ -0.78
SHPRH-209ENST00000521977 LZTFL1Q9NQ48 299 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 TMEM161AQ9NX61 479 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 MYO1AQ9UBC5 1043 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 TRIM10Q9UDY6 481 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 TFR2Q9UP52 801 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 ATP11BQ9Y2G3 1177 aa10.17□□□□□ -0.78
SHPRH-209ENST00000521977 KPNA7A9QM74 516 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 TACC1O75410 805 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 CALCAP01258 141 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 CYP1A1P04798 512 aaPredicted RBP10.16□□□□□ -0.78
SHPRH-209ENST00000521977 UNGP13051 313 aaPredicted RBP10.16□□□□□ -0.78
SHPRH-209ENST00000521977 CD58P19256 250 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 GNA15P30679 374 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 RPL9P32969 192 aaKnown RBP10.16□□□□□ -0.78
SHPRH-209ENST00000521977 CYP2C18P33260 490 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 RFC2P35250 354 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 RAP1GAPP47736 663 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 AARSP49588 968 aaKnown RBP eCLIP10.16□□□□□ -0.78
SHPRH-209ENST00000521977 TAF6P49848 677 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 RAD23BP54727 409 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 CCL23P55773 120 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 PRSS12P56730 875 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 LILRA4P59901 499 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 ETF1P62495 437 aaKnown RBP10.16□□□□□ -0.78
SHPRH-209ENST00000521977 KIF5AQ12840 1032 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 SV2CQ496J9 727 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 CLLU1OSQ5K130 101 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 TAF3Q5VWG9 929 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 SLC4A11Q8NBS3 891 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 PACSIN1Q9BY11 444 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 PPP1R12CQ9BZL4 782 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 ELOVL4Q9GZR5 314 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 TMEM39AQ9NV64 488 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 TAS2R14Q9NYV8 317 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 BARX2Q9UMQ3 279 aaPredicted RBP10.16□□□□□ -0.78
SHPRH-209ENST00000521977 PCDHGC3Q9UN70 934 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 DUSP10Q9Y6W6 482 aa10.16□□□□□ -0.78
SHPRH-209ENST00000521977 TDRD15B5MCY1 1934 aaKnown RBP10.15□□□□□ -0.78
SHPRH-209ENST00000521977 A0A0A6YYK5 440 aaPredicted RBP10.15□□□□□ -0.78
SHPRH-209ENST00000521977 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.15□□□□□ -0.78
SHPRH-209ENST00000521977 PODXLO00592 558 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 KIAA0355O15063 1070 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 FANCGO15287 622 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 RTN2O75298 545 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 CLSTN1O94985 981 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 H2AFZP0C0S5 128 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 TMEM253P0C7T8 217 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 PAX3P23760 479 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 GALCP54803 685 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 DSC1Q08554 894 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 TUSC3Q13454 348 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 UPP1Q16831 310 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 CLEC16AQ2KHT3 1053 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 SOWAHAQ2M3V2 549 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 ACAD10Q6JQN1 1059 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 TRIM72Q6ZMU5 477 aa10.15□□□□□ -0.78
SHPRH-209ENST00000521977 H2AFVQ71UI9 128 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms