RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 KBTBD7Q8WVZ9 684 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 ARNTL2Q8WYA1 636 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 CEP295NLQ96MC4 621 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 EMILIN2Q9BXX0 1053 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 RHOBTB2Q9BYZ6 727 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 INTS2Q9H0H0 1204 aaKnown RBP6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 RBSNQ9H1K0 784 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 TTYH1Q9H313 450 aaPredicted RBP6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 MMRN2Q9H8L6 949 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 APOBEC3GQ9HC16 384 aaKnown RBP6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 SIX2Q9NPC8 291 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 CEP72Q9P209 647 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 CDH9Q9ULB4 789 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 BARX2Q9UMQ3 279 aaPredicted RBP6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 L1RE1Q9UN81 338 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 SIK3Q9Y2K2 1263 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 STXBP5LQ9Y2K9 1186 aa6.81□□□□□ -1.32
IGHV4-55-201ENST00000520889 MYH10P35580 1976 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 A0A1W2PQJ5 194 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 C2orf71A6NGG8 1288 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 F8W810 466 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 RBAK-RBAKDNI3L0D1 243 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 GRM6O15303 877 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 CILPO75339 1184 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 ABLIM3O94929 683 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 CXCL14O95715 111 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 ADH1AP07327 375 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 POU2F2P09086 479 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 PAEPP09466 180 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 UCHL3P15374 230 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 SLC9A1P19634 815 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 TKTP29401 623 aaKnown RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 GNL1P36915 607 aaPredicted RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 PBX3P40426 434 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 PLXNA3P51805 1871 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 BPIFB4P59827 614 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 TSPY1Q01534 308 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 TRIM14Q14142 442 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 COL19A1Q14993 1142 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 STILQ15468 1287 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 PSMD5Q16401 504 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 CTXN3Q4LDR2 81 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 HSP90AA4PQ58FG1 418 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 INTS6LQ5JSJ4 861 aaKnown RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 KLHDC7AQ5VTJ3 777 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 WSCD1Q658N2 575 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 PHLDB3Q6NSJ2 640 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 FAM171BQ6P995 826 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 ELMSAN1Q6PJG2 1045 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 TMEM184AQ6ZMB5 413 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 TMC7Q7Z402 723 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 ADGRF2Q8IZF7 708 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 NEK11Q8NG66 645 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 ZNF461Q8TAF7 563 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 SPPL2BQ8TCT7 592 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 RIN2Q8WYP3 895 aaPredicted RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 SHC3Q92529 594 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 TATDN2Q93075 761 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 MRFAP1L1Q96HT8 127 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 FUBP3Q96I24 572 aaKnown RBP eCLIP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 TNIP3Q96KP6 325 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 NAP1L5Q96NT1 182 aaPredicted RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 MMS19Q96T76 1030 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 GAS2L1Q99501 681 aaPredicted RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 TCF25Q9BQ70 676 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 NT5C1AQ9BXI3 368 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 NAA15Q9BXJ9 866 aaKnown RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 STK33Q9BYT3 514 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 ZCWPW1Q9H0M4 648 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 NUCKS1Q9H1E3 243 aaKnown RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 PLEKHA4Q9H4M7 779 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 NSUN3Q9H649 340 aaKnown RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 ABCB6Q9NP58 842 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 ALG13Q9NP73 1137 aaKnown RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 DDX43Q9NXZ2 648 aaKnown RBP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 CACNG4Q9UBN1 327 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 GREB1Q4ZG55 1949 aa6.8□□□□□ -1.32
IGHV4-55-201ENST00000520889 PATJQ8NI35 1801 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 MYO7AQ13402 2215 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 EPOPA6NHQ4 379 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 PES1O00541 588 aaKnown RBP6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 TEX33O43247 280 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 LRRN2O75325 713 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 NOL4O94818 638 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 CCDC172P0C7W6 258 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 SRGAP2BP0DMP2 458 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 ATF2P15336 505 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 ACO1P21399 889 aaKnown RBP6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 IGFBP6P24592 240 aaPredicted RBP6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 DNAJB1P25685 340 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 MAGEA11P43364 429 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 FXR1P51114 621 aaKnown RBP eCLIP6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 ZNF132P52740 706 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 JAM2P57087 298 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 ERVFC1P60507 584 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 KCNC3Q14003 757 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 ARID5BQ14865 1188 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 GRIN2CQ14957 1233 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 SYCP1Q15431 976 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms