RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 TNFAIP8L3Q5GJ75 292 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 DENND2CQ68D51 928 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 SNRNP48Q6IEG0 339 aaKnown RBP9.13□□□□□ -0.95
SHPRH-208ENST00000520752 MFSD5Q6N075 450 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 RWDD4Q6NW29 188 aaKnown RBP9.13□□□□□ -0.95
SHPRH-208ENST00000520752 C4orf50Q6ZRC1 276 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 DYMQ7RTS9 669 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 REC114Q7Z4M0 266 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 C12orf40Q86WS4 652 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 GRAMD2AQ8IUY3 354 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 FITM2Q8N6M3 262 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 VPS37AQ8NEZ2 397 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 SCFD1Q8WVM8 642 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 GPRASP2Q96D09 838 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 NOX5Q96PH1 765 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 TRIM55Q9BYV6 548 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 IL1RAPL2Q9NP60 686 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 GID8Q9NWU2 228 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 UVRAGQ9P2Y5 699 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 PADI4Q9UM07 663 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 FAF1Q9UNN5 650 aaPredicted RBP9.13□□□□□ -0.95
SHPRH-208ENST00000520752 ACTL7BQ9Y614 415 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 MST1RQ04912 1400 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 A0A1W2PP64 1363 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 MED1Q15648 1581 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 CHD1O14646 1710 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 hCG_2014768A0A024R1R8 64 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 PVALEFA0A1B0GWK0 134 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 EIF4E1BA6NMX2 242 aaKnown RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 LGALS16A8MUM7 142 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 RASA4BC9J798 803 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 E9PMD0 336 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 HGSO14964 777 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 RGS16O15492 202 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 RASA4O43374 803 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 PSMG1O95456 288 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 CCNCP24863 283 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 ASPAP45381 313 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 GALK1P51570 392 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 GPC3P51654 580 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 POLGP54098 1239 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 IRX4P78413 519 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 EXOSC10Q01780 885 aaKnown RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 DSG1Q02413 1049 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 HSPA14Q0VDF9 509 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 ASPHQ12797 758 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 LPIN1Q14693 890 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 CLUL1Q15846 466 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 CNGA2Q16280 664 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 WDR72Q3MJ13 1102 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 KAZNQ674X7 775 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 NIPAL1Q6NVV3 410 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 MAEAQ7L5Y9 396 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 TMC3Q7Z5M5 1100 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 NET1Q7Z628 596 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 VSIG1Q86XK7 387 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 ERI1Q8IV48 349 aaKnown RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 ARMC10Q8N2F6 343 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 MB21D1Q8N884 522 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 GABPB2Q8TAK5 448 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 ZNF398Q8TD17 642 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 UBLCP1Q8WVY7 318 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 CKAP2Q8WWK9 683 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 DPF3Q92784 378 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 STMN2Q93045 179 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 NKD1Q969G9 470 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 MYRFLQ96LU7 910 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 MED15Q96RN5 788 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 TINF2Q9BSI4 451 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 TBC1D10AQ9BXI6 508 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 TXLNGYQ9BZA5 131 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 IMPG2Q9BZV3 1241 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 NDEL1Q9GZM8 345 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 ADAM7Q9H2U9 754 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 NHEJ1Q9H9Q4 299 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 CAPN10Q9HC96 672 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 VTA1Q9NP79 307 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 FAM105AQ9NUU6 356 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 TBC1D23Q9NUY8 699 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 FBXL5Q9UKA1 691 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 STX8Q9UNK0 236 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 HEY1Q9Y5J3 304 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.12□□□□□ -0.95
SHPRH-208ENST00000520752 ADAMTS12P58397 1594 aa9.12□□□□□ -0.95
SHPRH-208ENST00000520752 ARAP3Q8WWN8 1544 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 WDR19Q8NEZ3 1342 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 PRR36Q9H6K5 1346 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-208ENST00000520752 TTC26A0AVF1 554 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 GNAT3A8MTJ3 354 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 BOLA2-SMG1P6H3BVE0 249 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 ADCY3O60266 1144 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 FARP2O94887 1054 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-208ENST00000520752 KRT6AP02538 564 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 KRT6BP04259 564 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 ECHS1P30084 290 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 PDIA3P30101 505 aaKnown RBP9.11□□□□□ -0.95
SHPRH-208ENST00000520752 BCAP31P51572 246 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 NUP107P57740 925 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 CYP4A11Q02928 519 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms