RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 DDX3XO00571 662 aaKnown RBP eCLIP9.1□□□□□ -0.955e-9■□□□□ 8.7
VAPB-206ENST00000520497 HOXA2O43364 376 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 TACC1O75410 805 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 DDHD2O94830 711 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 CLSTN1O94985 981 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 FAM228BP0C875 321 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 KRT5P13647 590 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 CYP11B1P15538 503 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 CHRNB2P17787 502 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 CD58P19256 250 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 IBSPP21815 317 aaPredicted RBP9.1□□□□□ -0.95
VAPB-206ENST00000520497 IGFBP6P24592 240 aaPredicted RBP9.1□□□□□ -0.95
VAPB-206ENST00000520497 USP8P40818 1118 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 RAP1GAPP47736 663 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 PDE6CP51160 858 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 CLCNKBP51801 687 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 CDH8P55286 799 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 BPIFB4P59827 614 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 TNNC1P63316 161 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 FMO1Q01740 532 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 KIF5AQ12840 1032 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 SOWAHAQ2M3V2 549 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 CD300LGQ6UXG3 332 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 NYAP1Q6ZVC0 841 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 DPH6Q7L8W6 267 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 NOP9Q86U38 636 aaKnown RBP9.1□□□□□ -0.95
VAPB-206ENST00000520497 ZNF677Q86XU0 584 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 REXO1L1PQ8IX06 675 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 COLGALT2Q8IYK4 626 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 TMEM199Q8N511 208 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 TTC39CQ8N584 583 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 C3orf58Q8NDZ4 430 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 LNX1Q8TBB1 728 aaPredicted RBP9.1□□□□□ -0.95
VAPB-206ENST00000520497 URGCPQ8TCY9 931 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 WHAMMQ8TF30 809 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 SLC20A1Q8WUM9 679 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 ZNF592Q92610 1267 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 DDX27Q96GQ7 796 aaKnown RBP9.1□□□□□ -0.95
VAPB-206ENST00000520497 CASD1Q96PB1 797 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 PAAF1Q9BRP4 392 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 TBC1D13Q9NVG8 400 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 KANSL3Q9P2N6 904 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 CACNG4Q9UBN1 327 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 HMGXB4Q9UGU5 601 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 ADAMTS1Q9UHI8 967 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 BARX2Q9UMQ3 279 aaPredicted RBP9.1□□□□□ -0.95
VAPB-206ENST00000520497 PCDHB4Q9Y5E5 795 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 SNX9Q9Y5X1 595 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 CASTOR2A6NHX0 329 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 TMEM189-UBE2V1I3L0A0 370 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 EFCAB14O75071 495 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 BAIAP3O94812 1187 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 PAEPP09466 180 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 FAM163BP0C2L3 166 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 PAX3P23760 479 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 GNA15P30679 374 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 CASQ1P31415 396 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 VAV2P52735 878 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 TERF1P54274 439 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 RAD23BP54727 409 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 WDR5P61964 334 aaKnown RBP9.09□□□□□ -0.95
VAPB-206ENST00000520497 ETF1P62495 437 aaKnown RBP9.09□□□□□ -0.95
VAPB-206ENST00000520497 CDR2Q01850 454 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 CYP27A1Q02318 531 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 GFPT1Q06210 699 aaPredicted RBP9.09□□□□□ -0.95
VAPB-206ENST00000520497 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.09□□□□□ -0.95
VAPB-206ENST00000520497 ZNF662Q6ZS27 426 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 PALB2Q86YC2 1186 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 ZNF280BQ86YH2 543 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 GLYCTKQ8IVS8 523 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 RPUSD2Q8IZ73 545 aaKnown RBP9.09□□□□□ -0.95
VAPB-206ENST00000520497 TDHQ8IZJ6 230 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 TOP6BLQ8N6T0 577 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 SLC4A11Q8NBS3 891 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 KBTBD7Q8WVZ9 684 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 SENP8Q96LD8 212 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 TWNKQ96RR1 684 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 AGPAT1Q99943 283 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 ZSWIM1Q9BR11 485 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.09□□□□□ -0.95
VAPB-206ENST00000520497 RC3H2Q9HBD1 1191 aaKnown RBP9.09□□□□□ -0.95
VAPB-206ENST00000520497 IL23AQ9NPF7 189 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 NAGPAQ9UK23 515 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 LRFN2Q9ULH4 789 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 L1RE1Q9UN81 338 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 NME7Q9Y5B8 376 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 DENND4CQ5VZ89 1909 aa9.09□□□□□ -0.95
VAPB-206ENST00000520497 A0A0U1RQJ8 604 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 A0A1W2PPC1 479 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 RCCD1A6NED2 376 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 M0QZQ0 153 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 GABRDO14764 452 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 PJA2O43164 708 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 DGKIO75912 1065 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 KIF4AO95239 1232 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 CALCAP01258 141 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 ITGB1P05556 798 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 MMEP08473 750 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 WARSP23381 471 aaKnown RBP9.08□□□□□ -0.96
VAPB-206ENST00000520497 GATMP50440 423 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms