RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TMEM119Q4V9L6 283 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 ARSHQ5FYA8 562 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 ARL6IP4Q66PJ3 421 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 PARM1Q6UWI2 310 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 ZPBP2Q6X784 338 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 ANKS3Q6ZW76 656 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 CCDC105Q8IYK2 499 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 RGL4Q8IZJ4 473 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 DTWD2Q8NBA8 298 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 ST13P5Q8NFI4 369 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 ITFG1Q8TB96 612 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 SLC7A14Q8TBB6 771 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 FGF13Q92913 245 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 KCNN1Q92952 543 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 PLIN2Q99541 437 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 TCHPQ9BT92 498 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 SLC2A4RGQ9NR83 387 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 SLC38A7Q9NVC3 462 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 CNTN3Q9P232 1028 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 DNMT3BQ9UBC3 853 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 CDY1Q9Y6F8 540 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 NUMBLQ9Y6R0 609 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 MYO10Q9HD67 2058 aa10.13□□□□□ -0.79
CTNNA1-221ENST00000520339 ZFHX2Q9C0A1 2572 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 NPHP3-ACAD11A0A0J9YXS1 232 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 VWA3AA6NCI4 1184 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 H3BQV1 296 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 PODXLO00592 558 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 SYN3O14994 580 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 SLC26A4O43511 780 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 TOM1L1O75674 476 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 HARSP12081 509 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 NBL1P41271 181 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 MCM2P49736 904 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 MCL1Q07820 350 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 RAD51AP2Q09MP3 1159 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 SLC10A6Q3KNW5 377 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 SLC8B1Q6J4K2 584 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 MRPL14Q6P1L8 145 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 ETFBKMTQ8IXQ9 262 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 GPR152Q8TDT2 470 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 FGF14Q92915 247 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 C18orf25Q96B23 403 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 RBCK1Q9BYM8 510 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 TBC1D17Q9HA65 648 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 KCND2Q9NZV8 630 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 KCNH3Q9ULD8 1083 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 CA14Q9ULX7 337 aa10.12□□□□□ -0.79
CTNNA1-221ENST00000520339 RIF1Q5UIP0 2472 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 ARHGEF37A1IGU5 675 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 ABLIM3O94929 683 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 ZNF16P17020 682 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 GPC5P78333 572 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 ROR1Q01973 937 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 STRN3Q13033 797 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 NOLC1Q14978 699 aaKnown RBP eCLIP10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 SEZ6Q53EL9 994 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 ASCL5Q7RTU5 278 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 ZNF461Q8TAF7 563 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 LRRC15Q8TF66 581 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 SUSD3Q96L08 255 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 AK8Q96MA6 479 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 HAPLN2Q9GZV7 340 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 PLEKHA5Q9HAU0 1116 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 AVENQ9NQS1 362 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 ARHGEF3Q9NR81 526 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 HCFC1R1Q9NWW0 138 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 POLIQ9UNA4 740 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 SMC3Q9UQE7 1217 aa10.11□□□□□ -0.79
CTNNA1-221ENST00000520339 WDR27A2RRH5 827 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 H7C4K7 107 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 CLDN3O15551 220 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 SEC24AO95486 1093 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 RHOP08100 348 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 CLTAP09496 248 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 ANP32AP39687 249 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 NCKAP1LP55160 1127 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 STARD6P59095 220 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 ANGPT1Q15389 498 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 ZBTB6Q15916 424 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 PABPC1LQ4VXU2 614 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 LARP1BQ659C4 914 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 MTSS1LQ765P7 747 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 NPAS3Q8IXF0 933 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 RNF217Q8TC41 542 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 CDK5RAP3Q96JB5 506 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 CITED4Q96RK1 184 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 BLOC1S4Q9NUP1 217 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 DLGAP2Q9P1A6 1054 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 LARSQ9P2J5 1176 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 ANKFY1Q9P2R3 1169 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 FBXL5Q9UKA1 691 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 NUB1Q9Y5A7 615 aa10.1□□□□□ -0.79
CTNNA1-221ENST00000520339 TTC26A0AVF1 554 aa10.09□□□□□ -0.79
CTNNA1-221ENST00000520339 PRR23AA6NEV1 266 aa10.09□□□□□ -0.79
CTNNA1-221ENST00000520339 H0YCG3 227 aa10.09□□□□□ -0.79
CTNNA1-221ENST00000520339 BMP15O95972 392 aa10.09□□□□□ -0.79
CTNNA1-221ENST00000520339 PIGRP01833 764 aa10.09□□□□□ -0.79
CTNNA1-221ENST00000520339 ADRB2P07550 413 aa10.09□□□□□ -0.79
CTNNA1-221ENST00000520339 CXCL8P10145 99 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms