RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 ATAD1Q8NBU5 361 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 OR10T2Q8NGX3 314 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 ITFG1Q8TB96 612 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 RSAD2Q8WXG1 361 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 ERCC4Q92889 916 aaPredicted RBP15.24■□□□□ 0.03
VEGFA-221ENST00000520265 PBXIP1Q96AQ6 731 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 HPDLQ96IR7 371 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 RHOBTB2Q9BYZ6 727 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 MFSD1Q9H3U5 465 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 KCNK12Q9HB15 430 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 C11orf16Q9NQ32 467 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 RMND1Q9NWS8 449 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 RAPGEFL1Q9UHV5 662 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 CIZ1Q9ULV3 898 aaPredicted RBP15.24■□□□□ 0.03
VEGFA-221ENST00000520265 FRMD4BQ9Y2L6 1034 aa15.24■□□□□ 0.03
VEGFA-221ENST00000520265 MTMR11A4FU01 709 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 RHOBTB3O94955 611 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 CYP11A1P05108 521 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 ACAT1P24752 427 aaKnown RBP15.23■□□□□ 0.03
VEGFA-221ENST00000520265 EPHB3P54753 998 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 TNNC1P63316 161 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 MYL7Q01449 175 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 SIGLEC14Q08ET2 396 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 GPR17Q13304 367 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 TDGQ13569 410 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 VEPH1Q14D04 833 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 HFE2Q6ZVN8 426 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 RTL10Q7L3V2 364 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 TRAPPC11Q7Z392 1133 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 SUGP1Q8IWZ8 645 aaKnown RBP15.23■□□□□ 0.03
VEGFA-221ENST00000520265 C12orf56Q8IXR9 622 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 UBALD2Q8IYN6 164 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 DCP1BQ8IZD4 617 aaKnown RBP15.23■□□□□ 0.03
VEGFA-221ENST00000520265 PDCL2Q8N4E4 241 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 TTC9BQ8N6N2 239 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 FGF13Q92913 245 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 MCRS1Q96EZ8 462 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 SLITRK6Q9H5Y7 841 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 MMRN2Q9H8L6 949 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 ASAH2Q9NR71 780 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 DDX43Q9NXZ2 648 aaKnown RBP15.23■□□□□ 0.03
VEGFA-221ENST00000520265 SIX4Q9UIU6 781 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 CDH7Q9ULB5 785 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 L1RE1Q9UN81 338 aa15.23■□□□□ 0.03
VEGFA-221ENST00000520265 STK25O00506 426 aa15.22■□□□□ 0.03
VEGFA-221ENST00000520265 LAMP2P13473 410 aa15.22■□□□□ 0.03
VEGFA-221ENST00000520265 CEBPBP17676 345 aa15.22■□□□□ 0.03
VEGFA-221ENST00000520265 NR2F2P24468 414 aa15.22■□□□□ 0.03
VEGFA-221ENST00000520265 KCNB1Q14721 858 aa15.22■□□□□ 0.03
VEGFA-221ENST00000520265 SCARA3Q6AZY7 606 aa15.22■□□□□ 0.03
VEGFA-221ENST00000520265 ZCWPW1Q9H0M4 648 aa15.22■□□□□ 0.03
VEGFA-221ENST00000520265 CHMP5Q9NZZ3 219 aa15.22■□□□□ 0.03
VEGFA-221ENST00000520265 IGSF9Q9P2J2 1179 aa15.22■□□□□ 0.03
VEGFA-221ENST00000520265 EPS15L1Q9UBC2 864 aa15.22■□□□□ 0.03
VEGFA-221ENST00000520265 NXF1Q9UBU9 619 aaKnown RBP15.22■□□□□ 0.03
VEGFA-221ENST00000520265 DOCK6Q96HP0 2047 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 PDXKO00764 312 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 ZNF197O14709 1029 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 CFHP08603 1231 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 POU2F2P09086 479 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 KRT13P13646 458 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 GJA1P17302 382 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 RPL13P26373 211 aaKnown RBP15.21■□□□□ 0.03
VEGFA-221ENST00000520265 SLC5A9Q2M3M2 681 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 ISM2Q6H9L7 571 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 CENPPQ6IPU0 288 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 NPAS3Q8IXF0 933 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 HS6ST3Q8IZP7 471 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 TMEM86AQ8N2M4 240 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 MFSD14AQ96MC6 490 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 KXD1Q9BQD3 176 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 CRISPLD1Q9H336 500 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 SNX25Q9H3E2 840 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 KCTD10Q9H3F6 313 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 MAFFQ9ULX9 164 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 ZFP37Q9Y6Q3 630 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-221ENST00000520265 NUMBLQ9Y6R0 609 aa15.21■□□□□ 0.03
VEGFA-221ENST00000520265 MYO10Q9HD67 2058 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 LRRIQ3A6PVS8 624 aaPredicted RBP15.2■□□□□ 0.02
VEGFA-221ENST00000520265 NARSO43776 548 aaKnown RBP15.2■□□□□ 0.02
VEGFA-221ENST00000520265 PCSK1P29120 753 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 PSMC1P62191 440 aaKnown RBP15.2■□□□□ 0.02
VEGFA-221ENST00000520265 ZNF699Q32M78 642 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 SCARA5Q6ZMJ2 495 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 MTSS1LQ765P7 747 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 ITIH5Q86UX2 942 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 GUF1Q8N442 669 aaKnown RBP15.2■□□□□ 0.02
VEGFA-221ENST00000520265 TOP6BLQ8N6T0 577 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 GIPC2Q8TF65 315 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 TCEAL4Q96EI5 215 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 BORCS6Q96GS4 357 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 TSG101Q99816 390 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 LPIN3Q9BQK8 851 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 RTP3Q9BQQ7 232 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 PI4K2AQ9BTU6 479 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.2■□□□□ 0.021e-6■■□□□ 14
VEGFA-221ENST00000520265 CEP72Q9P209 647 aa15.2■□□□□ 0.02
VEGFA-221ENST00000520265 PCDHB5Q9Y5E4 795 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms