RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 TCHPQ9BT92 498 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 SLC6A16Q9GZN6 736 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 C17orf75Q9HAS0 396 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 CYP4F11Q9HBI6 524 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 LTB4R2Q9NPC1 389 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 TOPORSQ9NS56 1045 aaPredicted RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 TBC1D7Q9P0N9 293 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 ODF2LQ9ULJ1 636 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 MRPS23Q9Y3D9 190 aaKnown RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 RBM19Q9Y4C8 960 aaKnown RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 EML5Q05BV3 1969 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 GVINP1Q7Z2Y8 2422 aa9.4□□□□□ -0.91
PABPC1-213ENST00000519848 ANAPC1Q9H1A4 1944 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 H3BQV1 296 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 PIRO00625 290 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 PRRG1O14668 218 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 HNRNPDLO14979 420 aaKnown RBP9.39□□□□□ -0.91
PABPC1-213ENST00000519848 OGTO15294 1046 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 CLDN3O15551 220 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 TRAK2O60296 914 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 TADA3O75528 432 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 OAZ2O95190 189 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 CLTAP09496 248 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 SYT1P21579 422 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 CASP1P29466 404 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 LIG4P49917 911 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 GTF2BQ00403 316 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 DMWDQ09019 674 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 PKP1Q13835 747 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 SUZ12Q15022 739 aaKnown RBP9.39□□□□□ -0.91
PABPC1-213ENST00000519848 C9orf57Q5W0N0 161 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 TXNDC11Q6PKC3 985 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 TPRG1Q6ZUI0 275 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 OSTM1Q86WC4 334 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 ADSSL1Q8N142 457 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 MYCT1Q8N699 235 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 SAAL1Q96ER3 474 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 ZFYVE19Q96K21 471 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 PRRX2Q99811 253 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 TIPINQ9BVW5 301 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 RAB34Q9BZG1 259 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 CCSER1Q9C0I3 900 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 SMG9Q9H0W8 520 aaKnown RBP9.39□□□□□ -0.91
PABPC1-213ENST00000519848 GZF1Q9H116 711 aaPredicted RBP9.39□□□□□ -0.91
PABPC1-213ENST00000519848 AVENQ9NQS1 362 aaPredicted RBP9.39□□□□□ -0.91
PABPC1-213ENST00000519848 SLC38A7Q9NVC3 462 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 AFF4Q9UHB7 1163 aaKnown RBP9.39□□□□□ -0.91
PABPC1-213ENST00000519848 KCNH3Q9ULD8 1083 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 SLC27A5Q9Y2P5 690 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 NUB1Q9Y5A7 615 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 STYXL1Q9Y6J8 313 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 OTOGLQ3ZCN5 2332 aa9.39□□□□□ -0.91
PABPC1-213ENST00000519848 HELZP42694 1942 aaKnown RBP9.39□□□□□ -0.91
PABPC1-213ENST00000519848 A0A1W2PRU2 124 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 KANSL1LA0AUZ9 987 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 XYLBO75191 536 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 ECI2O75521 394 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 FAM13AO94988 1023 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 MYL4P12829 197 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 CPB1P15086 417 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 RPL9P32969 192 aaKnown RBP9.38□□□□□ -0.91
PABPC1-213ENST00000519848 LILRA4P59901 499 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 CYP4F8P98187 520 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 STRN3Q13033 797 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 DUSP4Q13115 394 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 UBXN2BQ14CS0 331 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 E2F4Q16254 413 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 UVSSAQ2YD98 709 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 SLC44A4Q53GD3 710 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 CENPPQ6IPU0 288 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 ZNF280DQ6N043 979 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 PKN3Q6P5Z2 889 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 Q6ZS52 159 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 SUMF1Q8NBK3 374 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 BICD1Q96G01 975 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 SENP8Q96LD8 212 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 PKMYT1Q99640 499 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 CBWD1Q9BRT8 395 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 MSTO1Q9BUK6 570 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 ZHX3Q9H4I2 956 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 PARVGQ9HBI0 331 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 RBM12Q9NTZ6 932 aaKnown RBP9.38□□□□□ -0.91
PABPC1-213ENST00000519848 POLR3BQ9NW08 1133 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-213ENST00000519848 SIX4Q9UIU6 781 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 UBQLN1Q9UMX0 589 aaKnown RBP9.38□□□□□ -0.91
PABPC1-213ENST00000519848 SIT1Q9Y3P8 196 aa9.38□□□□□ -0.91
PABPC1-213ENST00000519848 FAM186AA6NE01 2351 aa9.37□□□□□ -0.91
PABPC1-213ENST00000519848 FRMD3A2A2Y4 597 aa9.37□□□□□ -0.91
PABPC1-213ENST00000519848 GOLGA8IPA6NC78 632 aa9.37□□□□□ -0.91
PABPC1-213ENST00000519848 OTOL1A6NHN0 477 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-213ENST00000519848 GOLGA8JA6NMD2 632 aa9.37□□□□□ -0.91
PABPC1-213ENST00000519848 LRG1P02750 347 aa9.37□□□□□ -0.91
PABPC1-213ENST00000519848 LONP1P36776 959 aaKnown RBP9.37□□□□□ -0.91
PABPC1-213ENST00000519848 YWHAHQ04917 246 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-213ENST00000519848 PPP2R3AQ06190 1150 aa9.37□□□□□ -0.91
PABPC1-213ENST00000519848 SDHAF4Q5VUM1 108 aa9.37□□□□□ -0.91
PABPC1-213ENST00000519848 WSCD1Q658N2 575 aa9.37□□□□□ -0.91
PABPC1-213ENST00000519848 LMBRD2Q68DH5 695 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-213ENST00000519848 PDXDC1Q6P996 788 aa9.37□□□□□ -0.91
PABPC1-213ENST00000519848 ZNF720Q7Z2F6 126 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms