RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 GABRR2P28476 465 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 KPNA1P52294 538 aaPredicted RBP11.75□□□□□ -0.53
PVT1-208ENST00000519481 MLLT6P55198 1093 aaPredicted RBP11.75□□□□□ -0.53
PVT1-208ENST00000519481 CUL4AQ13619 759 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 MGAT5BQ3V5L5 792 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 SV2CQ496J9 727 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 SLC39A12Q504Y0 691 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 POTEHQ6S545 545 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 CCDC73Q6ZRK6 1079 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 ZNF720Q7Z2F6 126 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 TMC8Q8IU68 726 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 DCP1BQ8IZD4 617 aaKnown RBP11.75□□□□□ -0.53
PVT1-208ENST00000519481 SYCP3Q8IZU3 236 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 C2orf15Q8WU43 125 aaKnown RBP11.75□□□□□ -0.53
PVT1-208ENST00000519481 ZNF560Q96MR9 790 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 ACCSQ96QU6 501 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 SEPT5Q99719 369 aaPredicted RBP11.75□□□□□ -0.53
PVT1-208ENST00000519481 PYM1Q9BRP8 204 aaKnown RBP11.75□□□□□ -0.53
PVT1-208ENST00000519481 DNAJC25Q9H1X3 360 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 CRISPLD1Q9H336 500 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 C8orf33Q9H7E9 229 aaPredicted RBP11.75□□□□□ -0.53
PVT1-208ENST00000519481 LMAN1LQ9HAT1 526 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 WDR87Q6ZQQ6 2873 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 MYO15AQ9UKN7 3530 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 GCNT3O95395 438 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 VNN2O95498 520 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 LDHAP00338 332 aaKnown RBP11.74□□□□□ -0.53
PVT1-208ENST00000519481 IDEP14735 1019 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 CDC25CP30307 473 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 PNPLA4P41247 253 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 CCR3P51677 355 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 MTAPQ13126 283 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 ALCAMQ13740 583 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 LRRC32Q14392 662 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 ARHGAP29Q52LW3 1261 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 GPR158Q5T848 1215 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 ARID3BQ8IVW6 561 aaPredicted RBP11.74□□□□□ -0.53
PVT1-208ENST00000519481 GPR161Q8N6U8 529 aaKnown RBP11.74□□□□□ -0.53
PVT1-208ENST00000519481 SPPL2BQ8TCT7 592 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 CACTINQ8WUQ7 758 aaKnown RBP11.74□□□□□ -0.53
PVT1-208ENST00000519481 TMEM209Q96SK2 561 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 LRRC3Q9BY71 257 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 ZCWPW1Q9H0M4 648 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 CHRDQ9H2X0 955 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 PRMT8Q9NR22 394 aaPredicted RBP11.74□□□□□ -0.53
PVT1-208ENST00000519481 OBP2AQ9NY56 170 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 ZMYM5Q9UJ78 669 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 FBXO2Q9UK22 296 aaPredicted RBP11.74□□□□□ -0.53
PVT1-208ENST00000519481 RAB23Q9ULC3 237 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 R3HCC1Q9Y3T6 440 aaKnown RBP11.74□□□□□ -0.53
PVT1-208ENST00000519481 ZNF292O60281 2723 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 OTOGLQ3ZCN5 2332 aa11.74□□□□□ -0.53
PVT1-208ENST00000519481 MYMKA6NI61 221 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 KPNA7A9QM74 516 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 TISP43B9A030 160 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 NRG2O14511 850 aaPredicted RBP11.73□□□□□ -0.53
PVT1-208ENST00000519481 SOAT2O75908 522 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 CCNE1P24864 410 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 STAT6P42226 847 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 TFAMQ00059 246 aaKnown RBP11.73□□□□□ -0.53
PVT1-208ENST00000519481 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 TSPY1Q01534 308 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 CEBPZQ03701 1054 aaKnown RBP11.73□□□□□ -0.53
PVT1-208ENST00000519481 PTPAQ15257 358 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 L1TD1Q5T7N2 865 aaKnown RBP11.73□□□□□ -0.53
PVT1-208ENST00000519481 WSCD1Q658N2 575 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 MAMSTRQ6ZN01 415 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 USP49Q70CQ1 688 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 TTC9BQ8N6N2 239 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 SUMF1Q8NBK3 374 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 ZBTB44Q8NCP5 570 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 OR10T2Q8NGX3 314 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 CLIC6Q96NY7 704 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 FAM213AQ9BRX8 229 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 TASP1Q9H6P5 420 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 THG1LQ9NWX6 298 aaKnown RBP11.73□□□□□ -0.53
PVT1-208ENST00000519481 ABI2Q9NYB9 513 aaPredicted RBP11.73□□□□□ -0.53
PVT1-208ENST00000519481 TBC1D7Q9P0N9 293 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 PCDHB5Q9Y5E4 795 aa11.73□□□□□ -0.53
PVT1-208ENST00000519481 FANCMQ8IYD8 2048 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 HUS1O60921 280 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 PPP1R37O75864 691 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 SYT1P21579 422 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 SDHBP21912 280 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 GARTP22102 1010 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 CXCL12P48061 93 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 FCHO2Q0JRZ9 810 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 RESTQ13127 1097 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 FZD5Q13467 585 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 PUM1Q14671 1186 aaKnown RBP eCLIP11.72□□□□□ -0.53
PVT1-208ENST00000519481 NFE2Q16621 373 aaPredicted RBP11.72□□□□□ -0.53
PVT1-208ENST00000519481 STXBP5Q5T5C0 1151 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 TSSK4Q6SA08 328 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 STXBP4Q6ZWJ1 553 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 GAREM2Q75VX8 874 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 RALGPS2Q86X27 583 aaPredicted RBP11.72□□□□□ -0.53
PVT1-208ENST00000519481 BRSK2Q8IWQ3 736 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 CCDC65Q8IXS2 484 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms