RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 THEM5Q8N1Q8 247 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 PRSS33Q8NF86 280 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 OR5B17Q8NGF7 314 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 NOC3LQ8WTT2 800 aaKnown RBP10.08□□□□□ -0.8
HDAC3-215ENST00000519474 ING5Q8WYH8 240 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 ZNF516Q92618 1163 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 FAM122AQ96E09 287 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 ZSWIM3Q96MP5 696 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 ZCWPW1Q9H0M4 648 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 DNAJC25Q9H1X3 360 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 KIAA1586Q9HCI6 787 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 AGPAT3Q9NRZ7 376 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 USP25Q9UHP3 1055 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 DSEQ9UL01 958 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 MTMR11A4FU01 709 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 ZNF197O14709 1029 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 CLGNO14967 610 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 RRP9O43818 475 aaKnown RBP10.07□□□□□ -0.8
HDAC3-215ENST00000519474 SRFP11831 508 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 GJA1P17302 382 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 NDUFA8P51970 172 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 RBP5P82980 135 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 TCF15Q12870 199 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 PSMD2Q13200 908 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 SURF1Q15526 300 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 DUOXA2Q1HG44 320 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 BMT2Q1RMZ1 405 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 SV2CQ496J9 727 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 KMT5BQ4FZB7 885 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 CYP4A22Q5TCH4 519 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 ASTLQ6HA08 431 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-215ENST00000519474 TANGO2Q6ICL3 276 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 IQCEQ6IPM2 695 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 LIMS2Q7Z4I7 341 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 DNAJB7Q7Z6W7 309 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-215ENST00000519474 METTL23Q86XA0 190 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 TTC9BQ8N6N2 239 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 TMEM105Q8N8V8 129 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 GPR152Q8TDT2 470 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 GZF1Q9H116 711 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-215ENST00000519474 SLC2A4RGQ9NR83 387 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 TMLHEQ9NVH6 421 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 DMAC2Q9NW81 257 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 GDAP2Q9NXN4 497 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 GDE1Q9NZC3 331 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 HSFX1Q9UBD0 423 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 PTPRJQ12913 1337 aa10.07□□□□□ -0.8
HDAC3-215ENST00000519474 A0A1W2PQ27 194 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 A0A1W2PQ64 194 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 A0A1W2PQD8 194 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 GABRDO14764 452 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 SOAT2O75908 522 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 ZNF202O95125 648 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 KRT19P08727 400 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 MYL4P12829 197 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 CEBPBP17676 345 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 PNPLA4P41247 253 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 SYKP43405 635 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 ALDH1A3P47895 512 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 TUFMP49411 452 aaKnown RBP10.06□□□□□ -0.8
HDAC3-215ENST00000519474 EPHB3P54753 998 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 SOWAHAQ2M3V2 549 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 SLC39A12Q504Y0 691 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 SLC44A4Q53GD3 710 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 FAM78AQ5JUQ0 283 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 CWF19L1Q69YN2 538 aaKnown RBP10.06□□□□□ -0.8
HDAC3-215ENST00000519474 TRAPPC11Q7Z392 1133 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 OSTM1Q86WC4 334 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 TMC8Q8IU68 726 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 C12orf56Q8IXR9 622 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 SIX5Q8N196 739 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 ELMOD1Q8N336 334 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 PDCL2Q8N4E4 241 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 LRRC52Q8N7C0 313 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 XXYLT1Q8NBI6 393 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 KIAA0895Q8NCT3 520 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 FLCNQ8NFG4 579 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 ANKRD36BP1Q96IX9 119 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 MTMR12Q9C0I1 747 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 SCAND2PQ9GZW5 306 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-215ENST00000519474 GOLPH3LQ9H4A5 285 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 GDPD2Q9HCC8 539 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 CGNQ9P2M7 1197 aaKnown RBP10.06□□□□□ -0.8
HDAC3-215ENST00000519474 FBXL21Q9UKT6 434 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 ITGA11Q9UKX5 1188 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 CA14Q9ULX7 337 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 L1RE1Q9UN81 338 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 YIPF1Q9Y548 306 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 ATP6V1DQ9Y5K8 247 aa10.06□□□□□ -0.8
HDAC3-215ENST00000519474 TCHHQ07283 1943 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 HUS1O60921 280 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 ECI2O75521 394 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 RPN1P04843 607 aaKnown RBP10.05□□□□□ -0.8
HDAC3-215ENST00000519474 TMEM191BP0C7N4 346 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 PRR29P0C7W0 189 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 HAPLN1P10915 354 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-215ENST00000519474 LMO2P25791 158 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 CYP2J2P51589 502 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 NUBP1P53384 320 aa10.05□□□□□ -0.8
HDAC3-215ENST00000519474 STARD6P59095 220 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms