RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 CMTM8Q8IZV2 173 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 CPA6Q8N4T0 437 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 RPLP0P6Q8NHW5 317 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 C18orf25Q96B23 403 aaPredicted RBP9.7□□□□□ -0.86
PVT1-207ENST00000518528 ZMAT2Q96NC0 199 aaKnown RBP9.7□□□□□ -0.86
PVT1-207ENST00000518528 ACO2Q99798 780 aaKnown RBP9.7□□□□□ -0.86
PVT1-207ENST00000518528 FAM83CQ9BQN1 747 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 POLR3CQ9BUI4 534 aaPredicted RBP9.7□□□□□ -0.86
PVT1-207ENST00000518528 KIFC3Q9BVG8 833 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 EBF3Q9H4W6 596 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 SLC27A5Q9Y2P5 690 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 CYP46A1Q9Y6A2 500 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 UPK3BL1B0FP48 263 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 UPK3BL2E5RIL1 263 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 M0QZQ0 153 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 MEFVO15553 781 aaPredicted RBP9.69□□□□□ -0.86
PVT1-207ENST00000518528 XPOTO43592 962 aaKnown RBP9.69□□□□□ -0.86
PVT1-207ENST00000518528 SPATA31C1P0DKV0 1188 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 PAX3P23760 479 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 MAPK8P45983 427 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 GALK1P51570 392 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 STK3Q13188 491 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 DMP1Q13316 513 aaPredicted RBP9.69□□□□□ -0.86
PVT1-207ENST00000518528 BYSLQ13895 437 aaKnown RBP9.69□□□□□ -0.86
PVT1-207ENST00000518528 GREB1Q4ZG55 1949 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 TRIM61Q5EBN2 209 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 OVOS1Q6IE37 1185 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 RUFY3Q7L099 469 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 PROSER1Q86XN7 944 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 CATSPER3Q86XQ3 398 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 CEP120Q8N960 986 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 ATAD1Q8NBU5 361 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 OXER1Q8TDS5 423 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 CD101Q93033 1021 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 SPACA7Q96KW9 195 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 SEPT5Q99719 369 aaPredicted RBP9.69□□□□□ -0.86
PVT1-207ENST00000518528 TMEM134Q9H6X4 195 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 KLK13Q9UKR3 277 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 INVSQ9Y283 1065 aa9.69□□□□□ -0.86
PVT1-207ENST00000518528 RBM19Q9Y4C8 960 aaKnown RBP9.69□□□□□ -0.86
PVT1-207ENST00000518528 STK36Q9NRP7 1315 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 SPAARA0A1B0GVQ0 90 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 MTMR11A4FU01 709 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 REC8O95072 547 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 EDN1P05305 212 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 OR4Q2P0C623 313 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 ODC1P11926 461 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 HARSP12081 509 aaKnown RBP9.68□□□□□ -0.86
PVT1-207ENST00000518528 TYMPP19971 482 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 MUTP22033 750 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 RPA1P27694 616 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 CYP4F8P98187 520 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 SMARCB1Q12824 385 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 TOB2Q14106 344 aaPredicted RBP9.68□□□□□ -0.86
PVT1-207ENST00000518528 MGAT5BQ3V5L5 792 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 SOWAHCQ53LP3 525 aaPredicted RBP9.68□□□□□ -0.86
PVT1-207ENST00000518528 HAUS3Q68CZ6 603 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 C19orf48Q6RUI8 117 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 MPZL3Q6UWV2 235 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 SYT12Q8IV01 421 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 MRPS31Q92665 395 aaKnown RBP9.68□□□□□ -0.86
PVT1-207ENST00000518528 ATP2A3Q93084 1043 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 MTMR9Q96QG7 549 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 TARS2Q9BW92 718 aaKnown RBP9.68□□□□□ -0.86
PVT1-207ENST00000518528 SLC46A2Q9BY10 475 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 SMG9Q9H0W8 520 aaKnown RBP9.68□□□□□ -0.86
PVT1-207ENST00000518528 PLEKHA5Q9HAU0 1116 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 PTPRHQ9HD43 1115 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 HPS4Q9NQG7 708 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 TDP1Q9NUW8 608 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 KCNG1Q9UIX4 513 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 CIZ1Q9ULV3 898 aaPredicted RBP9.68□□□□□ -0.86
PVT1-207ENST00000518528 GPSM3Q9Y4H4 160 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 TIMM13Q9Y5L4 95 aaPredicted RBP9.68□□□□□ -0.86
PVT1-207ENST00000518528 SPAG17Q6Q759 2223 aa9.68□□□□□ -0.86
PVT1-207ENST00000518528 DSPP15924 2871 aaKnown RBP9.68□□□□□ -0.86
PVT1-207ENST00000518528 SETXQ7Z333 2677 aaKnown RBP9.68□□□□□ -0.86
PVT1-207ENST00000518528 CACNA1EQ15878 2313 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 VWA8A3KMH1 1905 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 TICRRQ7Z2Z1 1910 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 FAM221BA6H8Z2 402 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 PATE3B3GLJ2 98 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 TNFRSF10BO14763 440 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 MED24O75448 989 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 VNN2O95498 520 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 ARSAP15289 507 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 CYP3A5P20815 502 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 LRPAP1P30533 357 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 GJA4P35212 333 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 HOXD12P35452 270 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 IFNAR2P48551 515 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 STRN3Q13033 797 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 NR5A1Q13285 461 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 NOLC1Q14978 699 aaKnown RBP eCLIP9.67□□□□□ -0.866e-11■■■■□ 21.2
PVT1-207ENST00000518528 EARS2Q5JPH6 523 aaKnown RBP9.67□□□□□ -0.86
PVT1-207ENST00000518528 SPDYCQ5MJ68 293 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 TRIM68Q6AZZ1 485 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 ANO7Q6IWH7 933 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 RABEPKQ7Z6M1 372 aa9.67□□□□□ -0.86
PVT1-207ENST00000518528 PIP4P1Q86T03 277 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms