RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 CEP72Q9P209 647 aa26.52■■□□□ 1.84
PVT1-204ENST00000517525 TRIOO75962 3097 aa26.52■■□□□ 1.84
PVT1-204ENST00000517525 ZNF197O14709 1029 aa26.51■■□□□ 1.83
PVT1-204ENST00000517525 KIF20AO95235 890 aa26.51■■□□□ 1.83
PVT1-204ENST00000517525 DPH6Q7L8W6 267 aa26.51■■□□□ 1.83
PVT1-204ENST00000517525 NPAS3Q8IXF0 933 aa26.51■■□□□ 1.83
PVT1-204ENST00000517525 FBXL6Q8N531 539 aa26.51■■□□□ 1.83
PVT1-204ENST00000517525 TOP6BLQ8N6T0 577 aa26.51■■□□□ 1.83
PVT1-204ENST00000517525 CGRRF1Q99675 332 aa26.51■■□□□ 1.83
PVT1-204ENST00000517525 GZF1Q9H116 711 aaPredicted RBP26.51■■□□□ 1.83
PVT1-204ENST00000517525 MRPS23Q9Y3D9 190 aaKnown RBP26.51■■□□□ 1.83
PVT1-204ENST00000517525 YIPF1Q9Y548 306 aa26.51■■□□□ 1.83
PVT1-204ENST00000517525 ZDBF2Q9HCK1 2354 aa26.51■■□□□ 1.83
PVT1-204ENST00000517525 HUS1O60921 280 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 PRR29P0C7W0 189 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 TWF1Q12792 350 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 MYO1EQ12965 1108 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 DUSP4Q13115 394 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 IQCEQ6IPM2 695 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 MTSS1LQ765P7 747 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 TRAPPC11Q7Z392 1133 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 FMR1NBQ8N0W7 255 aaPredicted RBP26.5■■□□□ 1.83
PVT1-204ENST00000517525 PDCL2Q8N4E4 241 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 ZNF512Q96ME7 567 aaPredicted RBP26.5■■□□□ 1.83
PVT1-204ENST00000517525 TMEM209Q96SK2 561 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 CRISPLD1Q9H336 500 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 SMOC2Q9H3U7 446 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 CIZ1Q9ULV3 898 aaPredicted RBP26.5■■□□□ 1.83
PVT1-204ENST00000517525 L1RE1Q9UN81 338 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 TRAF3IP3Q9Y228 551 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 ASB3Q9Y575 518 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 ZNF318Q5VUA4 2279 aa26.5■■□□□ 1.83
PVT1-204ENST00000517525 EXOC3O60645 756 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 TUFMP49411 452 aaKnown RBP26.49■■□□□ 1.83
PVT1-204ENST00000517525 CLDN10P78369 228 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 NFIL3Q16649 462 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 SLC5A9Q2M3M2 681 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 SCARA3Q6AZY7 606 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 RDH13Q8NBN7 331 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 ATAD1Q8NBU5 361 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 ENGASEQ8NFI3 743 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 FAM84AQ96KN4 292 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 PGLYRP2Q96PD5 576 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 FNBP1Q96RU3 617 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 ACBD6Q9BR61 282 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 TSC2P49815 1807 aa26.49■■□□□ 1.83
PVT1-204ENST00000517525 GABRDO14764 452 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 KRT19P08727 400 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 FAM163BP0C2L3 166 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 BFSP1Q12934 665 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 CYP4A22Q5TCH4 519 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 LMBRD2Q68DH5 695 aaPredicted RBP26.48■■□□□ 1.83
PVT1-204ENST00000517525 LRRTM3Q86VH5 581 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 DCP1BQ8IZD4 617 aaKnown RBP26.48■■□□□ 1.83
PVT1-204ENST00000517525 SPPL2BQ8TCT7 592 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 RSAD2Q8WXG1 361 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 HPDLQ96IR7 371 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 CORO1BQ9BR76 489 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 LRRC3Q9BY71 257 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 WNT16Q9UBV4 365 aa26.48■■□□□ 1.83
PVT1-204ENST00000517525 R3HCC1Q9Y3T6 440 aaKnown RBP26.48■■□□□ 1.83
PVT1-204ENST00000517525 GOLGA6L4A6NEF3 574 aa26.47■■□□□ 1.83
PVT1-204ENST00000517525 STAU1O95793 577 aaKnown RBP26.47■■□□□ 1.83
PVT1-204ENST00000517525 SRFP11831 508 aa26.47■■□□□ 1.83
PVT1-204ENST00000517525 TNNI1P19237 187 aa26.47■■□□□ 1.83
PVT1-204ENST00000517525 ALDH1A3P47895 512 aa26.47■■□□□ 1.83
PVT1-204ENST00000517525 AP3M2P53677 418 aa26.47■■□□□ 1.83
PVT1-204ENST00000517525 EPHB3P54753 998 aa26.47■■□□□ 1.83
PVT1-204ENST00000517525 SNW1Q13573 536 aaKnown RBP26.47■■□□□ 1.83
PVT1-204ENST00000517525 GUF1Q8N442 669 aaKnown RBP26.47■■□□□ 1.83
PVT1-204ENST00000517525 DNAJC25Q9H1X3 360 aa26.47■■□□□ 1.83
PVT1-204ENST00000517525 SLC2A4RGQ9NR83 387 aa26.47■■□□□ 1.83
PVT1-204ENST00000517525 SNX9Q9Y5X1 595 aa26.47■■□□□ 1.83
PVT1-204ENST00000517525 NUMBLQ9Y6R0 609 aa26.47■■□□□ 1.83
PVT1-204ENST00000517525 MAPK13O15264 365 aa26.46■■□□□ 1.83
PVT1-204ENST00000517525 DLATP10515 647 aaKnown RBP26.46■■□□□ 1.83
PVT1-204ENST00000517525 LHX1P48742 406 aa26.46■■□□□ 1.83
PVT1-204ENST00000517525 NFE2Q16621 373 aaPredicted RBP26.46■■□□□ 1.83
PVT1-204ENST00000517525 SOWAHAQ2M3V2 549 aa26.46■■□□□ 1.83
PVT1-204ENST00000517525 SLC39A12Q504Y0 691 aa26.46■■□□□ 1.83
PVT1-204ENST00000517525 PARM1Q6UWI2 310 aa26.46■■□□□ 1.83
PVT1-204ENST00000517525 PDZD4Q76G19 769 aaPredicted RBP26.46■■□□□ 1.83
PVT1-204ENST00000517525 SUGP1Q8IWZ8 645 aaKnown RBP26.46■■□□□ 1.83
PVT1-204ENST00000517525 PARD3BQ8TEW8 1205 aa26.46■■□□□ 1.83
PVT1-204ENST00000517525 ZNF516Q92618 1163 aa26.46■■□□□ 1.83
PVT1-204ENST00000517525 FGF14Q92915 247 aa26.46■■□□□ 1.83
PVT1-204ENST00000517525 TIGD1Q96MW7 591 aa26.46■■□□□ 1.83
PVT1-204ENST00000517525 ASAH2Q9NR71 780 aa26.46■■□□□ 1.83
PVT1-204ENST00000517525 MOSPD3O75425 235 aa26.45■■□□□ 1.82
PVT1-204ENST00000517525 NR3C1P04150 777 aa26.45■■□□□ 1.82
PVT1-204ENST00000517525 CCR2P41597 374 aa26.45■■□□□ 1.82
PVT1-204ENST00000517525 NUBP1P53384 320 aa26.45■■□□□ 1.82
PVT1-204ENST00000517525 MYL7Q01449 175 aa26.45■■□□□ 1.82
PVT1-204ENST00000517525 TSPY1Q01534 308 aa26.45■■□□□ 1.82
PVT1-204ENST00000517525 FAM160A1Q05DH4 1040 aa26.45■■□□□ 1.82
PVT1-204ENST00000517525 ELOA2Q8IYF1 753 aaPredicted RBP26.45■■□□□ 1.82
PVT1-204ENST00000517525 PSMG2Q969U7 264 aa26.45■■□□□ 1.82
PVT1-204ENST00000517525 CCDC127Q96BQ5 260 aa26.45■■□□□ 1.82
PVT1-204ENST00000517525 PKMYT1Q99640 499 aa26.45■■□□□ 1.82
PVT1-204ENST00000517525 SLC27A5Q9Y2P5 690 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms