RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 PTCD2Q8WV60 388 aaKnown RBP9.38□□□□□ -0.91
PABPC1-202ENST00000517403 FOXD4L4Q8WXT5 416 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-202ENST00000517403 BICD1Q96G01 975 aa9.38□□□□□ -0.91
PABPC1-202ENST00000517403 SENP8Q96LD8 212 aa9.38□□□□□ -0.91
PABPC1-202ENST00000517403 PKMYT1Q99640 499 aa9.38□□□□□ -0.91
PABPC1-202ENST00000517403 CBWD1Q9BRT8 395 aa9.38□□□□□ -0.91
PABPC1-202ENST00000517403 MSTO1Q9BUK6 570 aa9.38□□□□□ -0.91
PABPC1-202ENST00000517403 ZHX3Q9H4I2 956 aa9.38□□□□□ -0.91
PABPC1-202ENST00000517403 PARVGQ9HBI0 331 aa9.38□□□□□ -0.91
PABPC1-202ENST00000517403 RBM12Q9NTZ6 932 aaKnown RBP9.38□□□□□ -0.91
PABPC1-202ENST00000517403 POLR3BQ9NW08 1133 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-202ENST00000517403 SIX4Q9UIU6 781 aa9.38□□□□□ -0.91
PABPC1-202ENST00000517403 UBQLN1Q9UMX0 589 aaKnown RBP9.38□□□□□ -0.91
PABPC1-202ENST00000517403 SIT1Q9Y3P8 196 aa9.38□□□□□ -0.91
PABPC1-202ENST00000517403 FAM186AA6NE01 2351 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 FRMD3A2A2Y4 597 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 GOLGA8IPA6NC78 632 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 OTOL1A6NHN0 477 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-202ENST00000517403 GOLGA8JA6NMD2 632 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 LRG1P02750 347 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 LONP1P36776 959 aaKnown RBP9.37□□□□□ -0.91
PABPC1-202ENST00000517403 YWHAHQ04917 246 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-202ENST00000517403 PPP2R3AQ06190 1150 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 SDHAF4Q5VUM1 108 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 WSCD1Q658N2 575 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 LMBRD2Q68DH5 695 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-202ENST00000517403 PDXDC1Q6P996 788 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 ZNF720Q7Z2F6 126 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 C1orf210Q8IVY1 113 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 C1orf127Q8N9H9 656 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 TTC8Q8TAM2 541 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 ZSCAN18Q8TBC5 510 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-202ENST00000517403 NELL1Q92832 810 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 NKD2Q969F2 451 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-202ENST00000517403 NXPE3Q969Y0 559 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 CLDN23Q96B33 292 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 ELMO3Q96BJ8 720 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 CDK5RAP3Q96JB5 506 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 AK8Q96MA6 479 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 PANK2Q9BZ23 570 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 ST6GALNAC4Q9H4F1 302 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 PLEKHA5Q9HAU0 1116 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 PRMT8Q9NR22 394 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-202ENST00000517403 KCND2Q9NZV8 630 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 LARSQ9P2J5 1176 aaKnown RBP9.37□□□□□ -0.91
PABPC1-202ENST00000517403 DPP7Q9UHL4 492 aa9.37□□□□□ -0.91
PABPC1-202ENST00000517403 DNAH14Q0VDD8 3507 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 FAM170BA6NMN3 283 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 TRAPPC3O43617 180 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 CYP11A1P05108 521 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 PTPN2P17706 415 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 CYP3A5P20815 502 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 DDIT3P35638 169 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 UBA7P41226 1012 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 MATR3P43243 847 aaKnown RBP eCLIP9.36□□□□□ -0.91
PABPC1-202ENST00000517403 TNK2Q07912 1038 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 MTAPQ13126 283 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 SRSF5Q13243 272 aaKnown RBP9.36□□□□□ -0.91
PABPC1-202ENST00000517403 GPR17Q13304 367 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 TPGS2Q68CL5 300 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 SHC4Q6S5L8 630 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 MTSS1LQ765P7 747 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 BRAPQ7Z569 592 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 OR5B17Q8NGF7 314 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 PLEKHO2Q8TD55 490 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 EZH1Q92800 747 aaPredicted RBP9.36□□□□□ -0.91
PABPC1-202ENST00000517403 ELSPBP1Q96BH3 223 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 RMDN1Q96DB5 314 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 BACH2Q9BYV9 841 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 ZCWPW1Q9H0M4 648 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 RPF1Q9H9Y2 349 aaKnown RBP9.36□□□□□ -0.91
PABPC1-202ENST00000517403 PARD6AQ9NPB6 346 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 TMEM30AQ9NV96 361 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 NDRG2Q9UN36 371 aaKnown RBP9.36□□□□□ -0.91
PABPC1-202ENST00000517403 L1RE1Q9UN81 338 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 CCL26Q9Y258 94 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 SRPRBQ9Y5M8 271 aaKnown RBP9.36□□□□□ -0.91
PABPC1-202ENST00000517403 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
PABPC1-202ENST00000517403 ZFP37Q9Y6Q3 630 aaPredicted RBP9.36□□□□□ -0.91
PABPC1-202ENST00000517403 SLC38A8A6NNN8 435 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 HEPACAM2A8MVW5 462 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 H7C4K7 107 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 ATP2C2O75185 946 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 PRPF6O94906 941 aaKnown RBP9.35□□□□□ -0.91
PABPC1-202ENST00000517403 HMGA1P17096 107 aaKnown RBP9.35□□□□□ -0.91
PABPC1-202ENST00000517403 TYMPP19971 482 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 TGM1P22735 817 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 ACAT1P24752 427 aaKnown RBP9.35□□□□□ -0.91
PABPC1-202ENST00000517403 GDI1P31150 447 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 NASPP49321 788 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-202ENST00000517403 SMTNP53814 917 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 PLD1Q13393 1074 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 TMEM132DQ14C87 1099 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 OVOS1Q6IE37 1185 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 ELMSAN1Q6PJG2 1045 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 PDZD4Q76G19 769 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-202ENST00000517403 BRSK2Q8IWQ3 736 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 PDILTQ8N807 584 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 GIPC2Q8TF65 315 aa9.35□□□□□ -0.91
PABPC1-202ENST00000517403 SMARCD2Q92925 531 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms