RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 WDR6Q9NNW5 1121 aaKnown RBP11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 SNX9Q9Y5X1 595 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 MTCL1Q9Y4B5 1905 aaKnown RBP11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 C5orf42Q9H799 3197 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 BIN1O00499 593 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 PHACTR2O75167 634 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 STAU1O95793 577 aaKnown RBP11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 POU2F2P09086 479 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 OR4Q2P0C623 313 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 CPB1P15086 417 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 ATICP31939 592 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 LHX1P48742 406 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 MYL6P60660 151 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 SMARCB1Q12824 385 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 TRPC3Q13507 836 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 WDR72Q3MJ13 1102 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 ZACNQ401N2 412 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 TDRD10Q5VZ19 366 aaKnown RBP11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 FOXR2Q6PJQ5 311 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 SV2AQ7L0J3 742 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 LRRTM3Q86VH5 581 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 ZC3H3Q8IXZ2 948 aaKnown RBP11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 FAM186BQ8IYM0 893 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 OR10T2Q8NGX3 314 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 TMEM209Q96SK2 561 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 TSG101Q99816 390 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 ACBD6Q9BR61 282 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 ZCWPW1Q9H0M4 648 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 XYLT2Q9H1B5 865 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 VRTNQ9H8Y1 702 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 PIDD1Q9HB75 910 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 CYP4F11Q9HBI6 524 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 L1RE1Q9UN81 338 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 USTQ9Y2C2 406 aa11.98□□□□□ -0.49
SCARNA20-201ENST00000516768 PRRG1O14668 218 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 XYLBO75191 536 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 VNN1O95497 513 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 VNN2O95498 520 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 KRT13P13646 458 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 SSTR3P32745 418 aaPredicted RBP11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 SGSM1Q2NKQ1 1148 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 FILIP1Q7Z7B0 1213 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 ATAD1Q8NBU5 361 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 SYAP1Q96A49 352 aaPredicted RBP11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 MMS19Q96T76 1030 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 DUSP9Q99956 384 aaKnown RBP11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 CLSTN2Q9H4D0 955 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 HSFX1Q9UBD0 423 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 NR2E1Q9Y466 385 aa11.97□□□□□ -0.49
SCARNA20-201ENST00000516768 PLXNA3P51805 1871 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 TRIM49BA6NDI0 452 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 GOLGA6L22H0YM25 854 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 CCL16O15467 120 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 TACC1O75410 805 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 PTPN2P17706 415 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 LMO2P25791 158 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 GTF2H1P32780 548 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 PPP3CAQ08209 521 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 DUSP4Q13115 394 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 BIRC3Q13489 604 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 NCOA4Q13772 614 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 SLC39A12Q504Y0 691 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 TTI2Q6NXR4 508 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 GRASPQ7Z6J2 395 aaPredicted RBP11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 RNF135Q8IUD6 432 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 DCP1BQ8IZD4 617 aaKnown RBP11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 NELFBQ8WX92 580 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 TAF4BQ92750 862 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 PGLYRP2Q96PD5 576 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 DDX43Q9NXZ2 648 aaKnown RBP11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 DNMT3BQ9UBC3 853 aaKnown RBP11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 SLC27A5Q9Y2P5 690 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 INSL5Q9Y5Q6 135 aa11.96□□□□□ -0.49
SCARNA20-201ENST00000516768 BICDL2A1A5D9 508 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 MTMR11A4FU01 709 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 C2CD4DB7Z1M9 353 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 PI4K2BG5E9Z4 385 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 SLC16A3O15427 465 aaKnown RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 N4BP1O75113 896 aaKnown RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 LRG1P02750 347 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 EPB41P11171 864 aaKnown RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 WARSP23381 471 aaKnown RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 PCSK1P29120 753 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 GNL1P36915 607 aaPredicted RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 GCLMP48507 274 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 TUFMP49411 452 aaKnown RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 MYL7Q01449 175 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 KLHL10Q6JEL2 608 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 FAM171BQ6P995 826 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 OTOP3Q7RTS5 596 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 OSTM1Q86WC4 334 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 ADGRF2Q8IZF7 708 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 ZDHHC14Q8IZN3 488 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 MLKLQ8NB16 471 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 GPT2Q8TD30 523 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 C2orf15Q8WU43 125 aaKnown RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 KBTBD7Q8WVZ9 684 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 KHSRPQ92945 711 aaKnown RBP eCLIP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms