RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 DMP1Q13316 513 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 SHBQ15464 509 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 CD300EQ496F6 205 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 AARS2Q5JTZ9 985 aaKnown RBP-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 MANEAQ5SRI9 462 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 STPG1Q5TH74 334 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 FBXW10Q5XX13 1052 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 ZNF343Q6P1L6 599 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 EP400NLQ6ZTU2 488 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 B4GALNT4Q76KP1 1039 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 ZNF551Q7Z340 670 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 SRGAP1Q7Z6B7 1085 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 MORC1Q86VD1 984 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 TXNDC2Q86VQ3 553 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 KRTAP13-1Q8IUC0 172 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 CHPFQ8IZ52 775 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 GALNT4Q8N4A0 578 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 ANKRD52Q8NB46 1076 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 TAS1R2Q8TE23 839 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 DLG3Q92796 817 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 FERMT2Q96AC1 680 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 DUX3Q96PT4 197 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 FERD3LQ96RJ6 166 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 DUSP9Q99956 384 aaKnown RBP-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 CDK19Q9BWU1 502 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 ANO3Q9BYT9 981 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 PITHD1Q9GZP4 211 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 ZNF696Q9H7X3 374 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 CATSPERZQ9NTU4 200 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 PI4KBQ9UBF8 816 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 PPT2Q9UMR5 302 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 SLC12A7Q9Y666 1083 aa-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 TTBK1Q5TCY1 1321 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-542P-201ENST00000516405 PJA2O43164 708 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 DLX3O60479 287 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 EFCAB14O75071 495 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 PRPF40AO75400 957 aaKnown RBP-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 NFATC1O95644 943 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 AMBPP02760 352 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 A1BGP04217 495 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 RAP2BP61225 183 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 ROM1Q03395 351 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 ITIH3Q06033 890 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 ACSM2AQ08AH3 577 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 KIF5AQ12840 1032 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 MAP4K2Q12851 820 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 TMEM132BQ14DG7 1078 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 NTRK3Q16288 839 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 ANO6Q4KMQ2 910 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 AASDHQ4L235 1098 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 PLAC9Q5JTB6 97 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 SLFN12LQ6IEE8 588 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 VHLLQ6RSH7 139 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 MAVSQ7Z434 540 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 LINC00612Q8N6U2 182 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 Q8N7P7 452 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 PUM2Q8TB72 1066 aaKnown RBP eCLIP-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 FAM222BQ8WU58 562 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 MAP4K1Q92918 833 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 FBXO17Q96EF6 278 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 MAML3Q96JK9 1138 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 CDC5LQ99459 802 aaKnown RBP-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 ACO2Q99798 780 aaKnown RBP-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 UNKQ9C0B0 810 aaKnown RBP-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 ARHGEF3Q9NR81 526 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 DLL3Q9NYJ7 618 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 LIMCH1Q9UPQ0 1083 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 DTX4Q9Y2E6 619 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 B3GALT1Q9Y5Z6 326 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 SSPOA2VEC9 5147 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 ASXL2Q76L83 1435 aa-0.14□□□□□ -2.43
RNU6-542P-201ENST00000516405 GREB1LQ9C091 1923 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 IGKV6-21A0A0C4DH24 114 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 PRAMEF33A0A0G2JMD5 474 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 PHGR1C9JFL3 82 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 SLC16A5O15375 505 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 CTIFO43310 598 aaKnown RBP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 PRAMEF10O60809 474 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 ITGA10O75578 1167 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 USP1O94782 785 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 SYF2O95926 243 aaKnown RBP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 CHRM5P08912 532 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 POLD2P49005 469 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 EEFSECP57772 596 aaKnown RBP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 NOMO3P69849 1222 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 FPGSQ05932 587 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 PMS2P11Q13670 270 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 MYBPC3Q14896 1274 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 NOMO1Q15155 1222 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 NOMO2Q5JPE7 1267 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 RRP12Q5JTH9 1297 aaKnown RBP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 PCID2Q5JVF3 399 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 PRAMEF14Q5SWL7 426 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 EGFLAMQ63HQ2 1017 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 ANKRD16Q6P6B7 361 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 TRIM72Q6ZMU5 477 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 RFX8Q6ZV50 586 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 MARK2Q7KZI7 788 aaKnown RBP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 SLC15A3Q8IY34 581 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 B3GALNT2Q8NCR0 500 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms