RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 FAM49AQ9H0Q0 323 aaPredicted RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 XPNPEP3Q9NQH7 507 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 DPP3Q9NY33 737 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 CNOT8Q9UFF9 292 aaKnown RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 BHMG1C9JSJ3 638 aaPredicted RBP10.86□□□□□ -0.67
SNF8-214ENST00000515174 PGRMC1O00264 195 aaKnown RBP10.86□□□□□ -0.67
SNF8-214ENST00000515174 THAP12O43422 761 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 XPOTO43592 962 aaKnown RBP10.86□□□□□ -0.67
SNF8-214ENST00000515174 CD4P01730 458 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 MYCNP04198 464 aaPredicted RBP10.86□□□□□ -0.67
SNF8-214ENST00000515174 CALB1P05937 261 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 CXCR5P32302 372 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 MAN1A1P33908 653 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 PEX5P50542 639 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 TNNC1P63316 161 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 TAP1Q03518 808 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 MYO1EQ12965 1108 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 STILQ15468 1287 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 WDR72Q3MJ13 1102 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 BEND6Q5SZJ8 279 aaPredicted RBP10.86□□□□□ -0.67
SNF8-214ENST00000515174 SERINC5Q86VE9 423 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 UBL4BQ8N7F7 174 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 PCSK9Q8NBP7 692 aaKnown RBP10.86□□□□□ -0.67
SNF8-214ENST00000515174 BEST2Q8NFU1 509 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 HPDLQ96IR7 371 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 OSMRQ99650 979 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.86□□□□□ -0.67
SNF8-214ENST00000515174 BARX2Q9UMQ3 279 aaPredicted RBP10.86□□□□□ -0.67
SNF8-214ENST00000515174 UBQLN1Q9UMX0 589 aaKnown RBP10.86□□□□□ -0.67
SNF8-214ENST00000515174 PCDHA3Q9Y5H8 950 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 SQORQ9Y6N5 450 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 SCINQ9Y6U3 715 aa10.86□□□□□ -0.67
SNF8-214ENST00000515174 PDCD11Q14690 1871 aaKnown RBP10.86□□□□□ -0.67
SNF8-214ENST00000515174 CITO14578 2027 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 TCRBV5S1A1TA0A578 114 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 CILPO75339 1184 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 NPTXRO95502 500 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 ITGB3P05106 788 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 WEE2P0C1S8 567 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 VDRP11473 427 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 CTNNA1P35221 906 aaKnown RBP10.85□□□□□ -0.67
SNF8-214ENST00000515174 RAD23BP54727 409 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 MRPS6P82932 125 aaKnown RBP10.85□□□□□ -0.67
SNF8-214ENST00000515174 CNGA2Q16280 664 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 NBPF20Q3BBV1 942 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 MAP9Q49MG5 647 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 UBXN11Q5T124 520 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 NAA35Q5VZE5 725 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 SCARA3Q6AZY7 606 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 CCNI2Q6ZMN8 369 aaPredicted RBP10.85□□□□□ -0.67
SNF8-214ENST00000515174 LIMS2Q7Z4I7 341 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 WHAMMQ8TF30 809 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 MS4A14Q96JA4 679 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 PNKPQ96T60 521 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 LBHD1Q9BQE6 289 aaPredicted RBP10.85□□□□□ -0.67
SNF8-214ENST00000515174 TSEN34Q9BSV6 310 aaKnown RBP10.85□□□□□ -0.67
SNF8-214ENST00000515174 PLVAPQ9BX97 442 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 SEZ6LQ9BYH1 1024 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 SLITRK6Q9H5Y7 841 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 PARVAQ9NVD7 372 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 SNTG2Q9NY99 539 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 ADAM22Q9P0K1 906 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 WDR35Q9P2L0 1181 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 L1RE1Q9UN81 338 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 AGAP1Q9UPQ3 857 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 CEP83Q9Y592 693 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 TRPV2Q9Y5S1 764 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 A0A0C4DFX4 3053 aa10.85□□□□□ -0.67
SNF8-214ENST00000515174 M0QZ92 97 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 MYO1FO00160 1098 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 PIRO00625 290 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 MAP2K7O14733 419 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 CEP104O60308 925 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 CAND2O75155 1236 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 PROSCO94903 275 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 KRT19P08727 400 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 RHOXF2BP0C7M4 288 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 ATF7P17544 494 aaPredicted RBP10.84□□□□□ -0.67
SNF8-214ENST00000515174 COMTP21964 271 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 RRM1P23921 792 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 POLR2BP30876 1174 aaKnown RBP10.84□□□□□ -0.67
SNF8-214ENST00000515174 PNPLA4P41247 253 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 VSNL1P62760 191 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 ZNF200P98182 395 aaPredicted RBP10.84□□□□□ -0.67
SNF8-214ENST00000515174 MAMLD1Q13495 774 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 FAM26DQ5JW98 314 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 CXCL17Q6UXB2 119 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 DPH6Q7L8W6 267 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 UNC93AQ86WB7 457 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 WDTC1Q8N5D0 677 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 SLC4A11Q8NBS3 891 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 FEZF2Q8TBJ5 459 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 TMEM40Q8WWA1 233 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 CPA5Q8WXQ8 436 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 ELMO3Q96BJ8 720 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 KIF12Q96FN5 646 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 TMEM176AQ96HP8 235 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 PPP1R16BQ96T49 567 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 RHOXF2Q9BQY4 288 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms