RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 EIF2AK1Q9BQI3 630 aaKnown RBP6.08□□□□□ -1.44
RFC1-216ENST00000514572 SPATA5L1Q9BVQ7 753 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 KATNAL1Q9BW62 490 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 BARX1Q9HBU1 254 aaPredicted RBP6.08□□□□□ -1.44
RFC1-216ENST00000514572 SWAP70Q9UH65 585 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 MID2Q9UJV3 735 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 ZNF785A8K8V0 405 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 E9PLN8 166 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 EIF3FO00303 357 aaPredicted RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 ALAS1P13196 640 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 EGR1P18146 543 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 ZNF135P52742 658 aaPredicted RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 WNT3P56703 355 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 GEMIN4P57678 1058 aaKnown RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 CLRN1P58418 232 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 PSMC1P62191 440 aaKnown RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 CSRP2Q16527 193 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 BMT2Q1RMZ1 405 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 SLC4A8Q2Y0W8 1093 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 RRAGBQ5VZM2 374 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 ARL6IP4Q66PJ3 421 aaKnown RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 FCRL6Q6DN72 434 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 USP17L6PQ6QN14 398 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 DOK3Q7L591 496 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 USP37Q86T82 979 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 GAS2L3Q86XJ1 694 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 PCSK9Q8NBP7 692 aaKnown RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 TXNDC5Q8NBS9 432 aaKnown RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 FBXO15Q8NCQ5 510 aaPredicted RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 SIMC1Q8NDZ2 872 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 TMIEQ8NEW7 156 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 PPHLN1Q8NEY8 458 aaKnown RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 SPPL3Q8TCT6 385 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 IPCEF1Q8WWN9 437 aaPredicted RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 USP13Q92995 863 aaPredicted RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 LRRC46Q96FV0 321 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 VKORC1Q9BQB6 163 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 DHX36Q9H2U1 1008 aaKnown RBP6.07□□□□□ -1.44
RFC1-216ENST00000514572 XPNPEP3Q9NQH7 507 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 USP40Q9NVE5 1235 aa6.07□□□□□ -1.44
RFC1-216ENST00000514572 RRN3P2A6NIE6 340 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 J3KRW8 73 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 IRAK2O43187 625 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 HOXA3O43365 443 aaPredicted RBP6.06□□□□□ -1.44
RFC1-216ENST00000514572 FAM155BO75949 473 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 STC2O76061 302 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 RHOBTB3O94955 611 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 TNFRSF6BO95407 300 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 PYGLP06737 847 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 CENPBP07199 599 aaPredicted RBP6.06□□□□□ -1.44
RFC1-216ENST00000514572 CKBP12277 381 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 BTF3P20290 206 aaKnown RBP6.06□□□□□ -1.44
RFC1-216ENST00000514572 ACVR2AP27037 513 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 MAN1A1P33908 653 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 VIPR2P41587 438 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 PNLIPRP1P54315 467 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 FOXD4Q12950 439 aaPredicted RBP6.06□□□□□ -1.44
RFC1-216ENST00000514572 SSPNQ14714 243 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 TAF5Q15542 800 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 FBXO47Q5MNV8 452 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 FBXO38Q6PIJ6 1188 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 ZDHHC24Q6UX98 284 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 RALYLQ86SE5 291 aaKnown RBP6.06□□□□□ -1.44
RFC1-216ENST00000514572 KRTAP1-3Q8IUG1 177 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 YAF2Q8IY57 180 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 OTUD7AQ8TE49 926 aaPredicted RBP6.06□□□□□ -1.44
RFC1-216ENST00000514572 SKA1Q96BD8 255 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 SNX27Q96L92 541 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 KLHL32Q96NJ5 620 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 MESP1Q9BRJ9 268 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 PAGR1Q9BTK6 254 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 STK31Q9BXU1 1019 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 AGO3Q9H9G7 860 aaKnown RBP6.06□□□□□ -1.44
RFC1-216ENST00000514572 MSL2Q9HCI7 577 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 XPR1Q9UBH6 696 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 SRP68Q9UHB9 627 aaKnown RBP6.06□□□□□ -1.44
RFC1-216ENST00000514572 ITGB1BP2Q9UKP3 347 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 SCAF8Q9UPN6 1271 aaKnown RBP6.06□□□□□ -1.44
RFC1-216ENST00000514572 TMX2Q9Y320 296 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 IRAK3Q9Y616 596 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 SLC4A7Q9Y6M7 1214 aa6.06□□□□□ -1.44
RFC1-216ENST00000514572 NCAPD3P42695 1498 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 TBKBP1A7MCY6 615 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 FFAR3O14843 346 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 CCP110O43303 1012 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 MED14OSP0DP75 135 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 CKMT1AP12532 417 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 TAL1P17542 331 aaPredicted RBP6.05□□□□□ -1.44
RFC1-216ENST00000514572 GLDCP23378 1020 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 NPEPPSP55786 919 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 MXRA7P84157 204 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 DDX10Q13206 875 aaKnown RBP6.05□□□□□ -1.44
RFC1-216ENST00000514572 RIN1Q13671 783 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 EFR3AQ14156 821 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 NPY5RQ15761 445 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 MAPKAPK3Q16644 382 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 FAM214AQ32MH5 1076 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 ARHGAP15Q53QZ3 475 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 HYIQ5T013 277 aa6.05□□□□□ -1.44
RFC1-216ENST00000514572 UTP14CQ5TAP6 766 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms