RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 MOCS3O95396 460 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 CYP1A1P04798 512 aaPredicted RBP17.03■□□□□ 0.32
NUP54-214ENST00000514307 UNGP13051 313 aaPredicted RBP17.03■□□□□ 0.32
NUP54-214ENST00000514307 SCNN1GP51170 649 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 SNX16P57768 344 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 TUSC3Q13454 348 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 SGO2Q562F6 1265 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 ABI1Q8IZP0 508 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 TMEM86AQ8N2M4 240 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 GSTCDQ8NEC7 633 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 OR6B3Q8NGW1 331 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 RFFLQ8WZ73 363 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 CYFIP2Q96F07 1278 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 PAWRQ96IZ0 340 aaKnown RBP17.03■□□□□ 0.32
NUP54-214ENST00000514307 FAM193BQ96PV7 902 aaPredicted RBP17.03■□□□□ 0.32
NUP54-214ENST00000514307 WDR24Q96S15 920 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 PACSIN1Q9BY11 444 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 SDCBP2Q9H190 292 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 SMYD3Q9H7B4 428 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 ACP6Q9NPH0 428 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 MIOSQ9NXC5 875 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 TFR2Q9UP52 801 aa17.03■□□□□ 0.32
NUP54-214ENST00000514307 PODXLO00592 558 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 CYB561D2O14569 222 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 CXCL10P02778 98 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 ABCB4P21439 1286 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 NDST1P52848 882 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 SOX4Q06945 474 aaPredicted RBP17.02■□□□□ 0.32
NUP54-214ENST00000514307 IKBKEQ14164 716 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 NOMO2Q5JPE7 1267 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 DSTYKQ6XUX3 929 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 METTL23Q86XA0 190 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 PHF13Q86YI8 300 aaPredicted RBP17.02■□□□□ 0.32
NUP54-214ENST00000514307 SLC4A11Q8NBS3 891 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 SLC35G2Q8TBE7 412 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 TNIP3Q96KP6 325 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 MIS12Q9H081 205 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 MRPL47Q9HD33 250 aaKnown RBP17.02■□□□□ 0.32
NUP54-214ENST00000514307 RNF19AQ9NV58 838 aa17.02■□□□□ 0.32
NUP54-214ENST00000514307 A8MXQ7 604 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 BUB1O43683 1085 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 POMCP01189 267 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 CLTBP09497 229 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 PRLRP16471 622 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 IBSPP21815 317 aaPredicted RBP17.01■□□□□ 0.31
NUP54-214ENST00000514307 WARSP23381 471 aaKnown RBP17.01■□□□□ 0.31
NUP54-214ENST00000514307 RAP1GAPP47736 663 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 LHX1P48742 406 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 HADHBP55084 474 aaKnown RBP17.01■□□□□ 0.31
NUP54-214ENST00000514307 CENPCQ03188 943 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
NUP54-214ENST00000514307 SOWAHAQ2M3V2 549 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 LIMS2Q7Z4I7 341 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 MCOLN2Q8IZK6 566 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 CRYBG2Q8N1P7 616 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 SPATA18Q8TC71 538 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 WHAMMQ8TF30 809 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 CPA5Q8WXQ8 436 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 ELOVL4Q9GZR5 314 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 THAP2Q9H0W7 228 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 TAS2R14Q9NYV8 317 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 ADAM22Q9P0K1 906 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 CTTNBP2NLQ9P2B4 639 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 UVRAGQ9P2Y5 699 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 LCMT1Q9UIC8 334 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 GTF3C4Q9UKN8 822 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 DSEQ9UL01 958 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 INPP5FQ9Y2H2 1132 aa17.01■□□□□ 0.31
NUP54-214ENST00000514307 MEIS3P2A8K0S8 358 aa17■□□□□ 0.31
NUP54-214ENST00000514307 PPEF2O14830 753 aa17■□□□□ 0.31
NUP54-214ENST00000514307 CYP1A2P05177 515 aa17■□□□□ 0.31
NUP54-214ENST00000514307 CALB1P05937 261 aa17■□□□□ 0.31
NUP54-214ENST00000514307 BRD2P25440 801 aaKnown RBP17■□□□□ 0.31
NUP54-214ENST00000514307 CDH5P33151 784 aaPredicted RBP17■□□□□ 0.31
NUP54-214ENST00000514307 CLCNKBP51801 687 aa17■□□□□ 0.31
NUP54-214ENST00000514307 TERF1P54274 439 aa17■□□□□ 0.31
NUP54-214ENST00000514307 CCL23P55773 120 aa17■□□□□ 0.31
NUP54-214ENST00000514307 RNASELQ05823 741 aaKnown RBP17■□□□□ 0.31
NUP54-214ENST00000514307 UPP1Q16831 310 aa17■□□□□ 0.31
NUP54-214ENST00000514307 NAA35Q5VZE5 725 aa17■□□□□ 0.31
NUP54-214ENST00000514307 ERICH1Q86X53 443 aa17■□□□□ 0.31
NUP54-214ENST00000514307 OLIG1Q8TAK6 271 aa17■□□□□ 0.31
NUP54-214ENST00000514307 SENP8Q96LD8 212 aa17■□□□□ 0.31
NUP54-214ENST00000514307 MRPL45Q9BRJ2 306 aaKnown RBP17■□□□□ 0.31
NUP54-214ENST00000514307 AVENQ9NQS1 362 aaPredicted RBP17■□□□□ 0.31
NUP54-214ENST00000514307 PCDHGC5Q9Y5F6 944 aa17■□□□□ 0.31
NUP54-214ENST00000514307 HTTP42858 3142 aa17■□□□□ 0.31
NUP54-214ENST00000514307 NCANO14594 1321 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 SPTLC1O15269 473 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 TRAPPC3O43617 180 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 CYP2C18P33260 490 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 TUBB4BP68371 445 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 GPNMBQ14956 572 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 PAPD7Q5XG87 772 aaKnown RBP16.99■□□□□ 0.31
NUP54-214ENST00000514307 LCLAT1Q6UWP7 414 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 PALB2Q86YC2 1186 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 TPCN2Q8NHX9 752 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 TFAP2BQ92481 460 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 ZNF653Q96CK0 615 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 PPP1R12CQ9BZL4 782 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms