RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 ZRANB2O95218 330 aaKnown RBP eCLIP2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 RPLP2P05387 115 aaKnown RBP2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 U2AF1L5P0DN76 240 aaPredicted RBP2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 MTHFD1P11586 935 aaKnown RBP2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 VCAM1P19320 739 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 PDCP20941 246 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 GATA3P23771 443 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 ITPKBP27987 946 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 WASP42768 502 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 CDC42EP1Q00587 391 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 U2AF1Q01081 240 aaKnown RBP eCLIP2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 EXOSC10Q01780 885 aaKnown RBP2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 FPGSQ05932 587 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 GEN1Q17RS7 908 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 PABPC1LQ4VXU2 614 aaKnown RBP2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 GADL1Q6ZQY3 521 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 MIGA2Q7L4E1 593 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 ZBTB46Q86UZ6 589 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 Q8NA96 180 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 TMIEQ8NEW7 156 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 NUP133Q8WUM0 1156 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 PTCD3Q96EY7 689 aaKnown RBP2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 C1orf43Q9BWL3 253 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 RNPEPQ9H4A4 650 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 AASDHPPTQ9NRN7 309 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 MRPS18AQ9NVS2 196 aaKnown RBP2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 CDYLQ9Y232 598 aa2.62□□□□□ -1.99
SMARCAD1-208ENST00000514232 IGKV2D-30A0A075B6S6 120 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 GOLGA6CA6NDK9 693 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 GOLGA6BA6NDN3 693 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 MARCH11A6NNE9 402 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 F2RL2O00254 374 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 MARCH6O60337 910 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 VPS4BO75351 444 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 IL33O95760 270 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 CD1AP06126 327 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 GOLGA6DP0CG33 693 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 SNHG28P0DPA3 235 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 ALAS1P13196 640 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 MALP21145 153 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 PSMC1P62191 440 aaKnown RBP2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 MXRA7P84157 204 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 TLE1Q04724 770 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 SF3B3Q15393 1217 aaKnown RBP2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 ETFDHQ16134 617 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 KRT71Q3SY84 523 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 HSP90AB2PQ58FF8 381 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 MTX3Q5HYI7 312 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 DACT2Q5SW24 774 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 ODR4Q5SWX8 454 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 GJC2Q5T442 439 aaPredicted RBP2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 KIAA1161Q6NSJ0 714 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 CATIPQ7Z7H3 387 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 FAM43AQ8N2R8 423 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 MIER2Q8N344 545 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 IL17RDQ8NFM7 739 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 NLGN4YQ8NFZ3 816 aaPredicted RBP2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 SLC30A5Q8TAD4 765 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 TMEM125Q96AQ2 219 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 BOD1Q96IK1 185 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 KLHL32Q96NJ5 620 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 GALNT9Q9HCQ5 603 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 TYW1Q9NV66 732 aaKnown RBP2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 DDX56Q9NY93 547 aaKnown RBP2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 GOLGA6AQ9NYA3 693 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 FAM30AQ9NZY2 134 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 IP6K2Q9UHH9 426 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 AGAP1Q9UPQ3 857 aa2.61□□□□□ -1.99
SMARCAD1-208ENST00000514232 KAT6AQ92794 2004 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 E2F8A0AVK6 867 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 PRSS29PA6NIE9 313 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 E9PLN8 166 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 DTNBO60941 627 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 SLC43A1O75387 559 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 HAUS5O94927 633 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 POU2F2P09086 479 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 PDGFRBP09619 1106 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 SMARCA1P28370 1054 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 HNRNPMP52272 730 aaKnown RBP eCLIP2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 MC2RQ01718 297 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 ATP2B3Q16720 1220 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 CCDC93Q567U6 631 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 CCDC157Q569K6 752 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 DGKKQ5KSL6 1271 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 ZNF626Q68DY1 528 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 PPP4R3AQ6IN85 833 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 Q6ZNX1 250 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 TTC7BQ86TV6 843 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 CFAP52Q8N1V2 620 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 SSH1Q8WYL5 1049 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 VKORC1Q9BQB6 163 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 AIFM2Q9BRQ8 373 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 PACSIN1Q9BY11 444 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 SLC13A1Q9BZW2 595 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 IL17RBQ9NRM6 502 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 TMEM74BQ9NUR3 256 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 TBCCD1Q9NVR7 557 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 CTTNBP2NLQ9P2B4 639 aa2.6□□□□□ -1.99
SMARCAD1-208ENST00000514232 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms