RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 ATRIPQ8WXE1 791 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 FAM3CQ92520 227 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 PSMG2Q969U7 264 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 E2F7Q96AV8 911 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 CLIC6Q96NY7 704 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 LRRC3BQ96PB8 259 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 LPIN3Q9BQK8 851 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 STRA6Q9BX79 667 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 CHRDQ9H2X0 955 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 ATXN3LQ9H3M9 355 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 DPP3Q9NY33 737 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 STK17AQ9UEE5 414 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 ASB3Q9Y575 518 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 SCN1AP35498 2009 aa13.21□□□□□ -0.29
SNHG4-208ENST00000514110 EP300Q09472 2414 aaPredicted RBP13.2□□□□□ -0.3
SNHG4-208ENST00000514110 MYMKA6NI61 221 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 CYB561D2O14569 222 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 LILRB5O75023 590 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 TDGF1P13385 188 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 ATF6P18850 670 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 CCNE1P24864 410 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 GABRR2P28476 465 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 WNT7BP56706 349 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 FCHO2Q0JRZ9 810 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 RESTQ13127 1097 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 RRAGBQ5VZM2 374 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 WSCD1Q658N2 575 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 LRRTM3Q86VH5 581 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 POMGNT1Q8WZA1 660 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 HVCN1Q96D96 273 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 DNAJC19Q96DA6 116 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 BORCS6Q96GS4 357 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 SEPT5Q99719 369 aaPredicted RBP13.2□□□□□ -0.3
SNHG4-208ENST00000514110 PYM1Q9BRP8 204 aaKnown RBP13.2□□□□□ -0.3
SNHG4-208ENST00000514110 MRPL44Q9H9J2 332 aaKnown RBP13.2□□□□□ -0.3
SNHG4-208ENST00000514110 LMAN1LQ9HAT1 526 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 HSFX1Q9UBD0 423 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 DSEQ9UL01 958 aa13.2□□□□□ -0.3
SNHG4-208ENST00000514110 SRPRBQ9Y5M8 271 aaKnown RBP13.2□□□□□ -0.3
SNHG4-208ENST00000514110 CHADO15335 359 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 CHRNB1P11230 501 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 SYT1P21579 422 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 SOX9P48436 509 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 TAF6P49848 677 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 CYP4F8P98187 520 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 POU5F1Q01860 360 aaKnown RBP13.19□□□□□ -0.3
SNHG4-208ENST00000514110 CEBPZQ03701 1054 aaKnown RBP13.19□□□□□ -0.3
SNHG4-208ENST00000514110 MGAT5BQ3V5L5 792 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 WDR44Q5JSH3 913 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 GPR158Q5T848 1215 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 SV2BQ7L1I2 683 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 ITIH5Q86UX2 942 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 METTL23Q86XA0 190 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 YAF2Q8IY57 180 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 CSGALNACT1Q8TDX6 532 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 GIPC2Q8TF65 315 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 ZFYVE19Q96K21 471 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 FGFBP2Q9BYJ0 223 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 IL21Q9HBE4 155 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 SMG5Q9UPR3 1016 aaKnown RBP13.19□□□□□ -0.3
SNHG4-208ENST00000514110 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
SNHG4-208ENST00000514110 DNAH14Q0VDD8 3507 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 TCHHQ07283 1943 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 A0A087X0B3 334 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 SLC38A8A6NNN8 435 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 KPNA7A9QM74 516 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 IL18RAPO95256 599 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 GAP43P17677 238 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 PDCP20941 246 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 TUFMP49411 452 aaKnown RBP13.18□□□□□ -0.3
SNHG4-208ENST00000514110 CASP5P51878 434 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 MLLT6P55198 1093 aaPredicted RBP13.18□□□□□ -0.3
SNHG4-208ENST00000514110 GAS6Q14393 721 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 POSTNQ15063 836 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 ARHGAP15Q53QZ3 475 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
SNHG4-208ENST00000514110 SCARA3Q6AZY7 606 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 THEM5Q8N1Q8 247 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 SAAL1Q96ER3 474 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 FAM84AQ96KN4 292 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 ACCSQ96QU6 501 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 FAM213AQ9BRX8 229 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 PANK2Q9BZ23 570 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 EPC1Q9H2F5 836 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 NCDNQ9UBB6 729 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 SEL1LQ9UBV2 794 aa13.18□□□□□ -0.3
SNHG4-208ENST00000514110 NUP210Q8TEM1 1887 aaPredicted RBP13.18□□□□□ -0.3
SNHG4-208ENST00000514110 MYBPHLA2RUH7 354 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
SNHG4-208ENST00000514110 GCNT3O95395 438 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 PRAMEF12O95522 483 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 FGF19O95750 216 aa13.17□□□□□ -0.3
SNHG4-208ENST00000514110 HAPLN1P10915 354 aaPredicted RBP13.17□□□□□ -0.3
SNHG4-208ENST00000514110 KPNA1P52294 538 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms