RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 RNF8O76064 485 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 GGPS1O95749 300 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 OAS1P00973 400 aaKnown RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 RALAP11233 206 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 KRT4P19013 534 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 RRM1P23921 792 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 PPP3CAQ08209 521 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 DYNC1I2Q13409 638 aaKnown RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 SYTL5Q8TDW5 730 aaPredicted RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 DEFB129Q9H1M3 183 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 WASF2Q9Y6W5 498 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 MAGEA13PA6NCF6 341 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 BANF1O75531 89 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 ACADSP16219 412 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 GCLCP48506 637 aaPredicted RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 RPS6P62753 249 aaKnown RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 PDIA2Q13087 525 aaKnown RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 GPS1Q13098 491 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 RASA3Q14644 834 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 WASHC2DQ5SRD0 308 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 LLGL2Q6P1M3 1020 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 SLC47A2Q86VL8 602 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 PPP1R14CQ8TAE6 165 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 NMD3Q96D46 503 aaKnown RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 TAAR1Q96RJ0 339 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 RMDN3Q96TC7 470 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 STRA6Q9BX79 667 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 GPR88Q9GZN0 384 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 UBIAD1Q9Y5Z9 338 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 ZNF536O15090 1300 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 WDR64B1ANS9 1081 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 WNT10BO00744 389 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 WFS1O76024 890 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 NPTXRO95502 500 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 ZSCAN5DPP0CG00 497 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 CCNB1P14635 433 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 ADRA1DP25100 572 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 PSMC5P62195 406 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 ARHGEF16Q5VV41 709 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 C1orf146Q5VVC0 180 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 ARHGAP24Q8N264 748 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 CCDC89Q8N998 374 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 CLEC4DQ8WXI8 215 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 CCDC124Q96CT7 223 aaKnown RBP10.16□□□□□ -0.78
VCAN-210ENST00000513960 TIPINQ9BVW5 301 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 TMEM117Q9H0C3 514 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 GPRC5CQ9NQ84 441 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 WDR35Q9P2L0 1181 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 LRRC42Q9Y546 428 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.16□□□□□ -0.78
VCAN-210ENST00000513960 A0A1W2PPM1 405 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 DHX15O43143 795 aaKnown RBP10.16□□□□□ -0.78
VCAN-210ENST00000513960 CHRNB2P17787 502 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 SERPINB3P29508 390 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 JAK3P52333 1124 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 IRX4P78413 519 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 MRPS9P82933 396 aaKnown RBP10.16□□□□□ -0.78
VCAN-210ENST00000513960 TMED1Q13445 227 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 SLC1A5Q15758 541 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 PARP6Q2NL67 630 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 USP37Q86T82 979 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 CTAGE3PQ8IX95 158 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 ACSF2Q96CM8 615 aaPredicted RBP10.16□□□□□ -0.78
VCAN-210ENST00000513960 THTPAQ9BU02 230 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 GINM1Q9NU53 330 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 WHRNQ9P202 907 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 SLC4A7Q9Y6M7 1214 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 TMEM150BA6NC51 233 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 B2RBV5 119 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 SGK1O00141 431 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 USP1O94782 785 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 GNAZP19086 355 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 SCNN1BP51168 640 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 EPHB1P54762 984 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 MFAP3P55082 362 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 SLC34A1Q06495 639 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 DMP1Q13316 513 aaPredicted RBP10.16□□□□□ -0.78
VCAN-210ENST00000513960 TNFAIP1Q13829 316 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 OTOAQ7RTW8 1153 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 NLRX1Q86UT6 975 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 C12orf56Q8IXR9 622 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 C4orf19Q8IY42 314 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 ATL2Q8NHH9 583 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 SNRNP27Q8WVK2 155 aaKnown RBP10.16□□□□□ -0.78
VCAN-210ENST00000513960 CPA5Q8WXQ8 436 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 CENPKQ9BS16 269 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 ARL8BQ9NVJ2 186 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 NDE1Q9NXR1 346 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 ANKFY1Q9P2R3 1169 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 ANGPTL2Q9UKU9 493 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 R3HDM2Q9Y2K5 976 aaKnown RBP10.16□□□□□ -0.78
VCAN-210ENST00000513960 NEU2Q9Y3R4 380 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 PSMG1O95456 288 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 RXRBP28702 533 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 SFNP31947 248 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 SKIV2L2P42285 1042 aaKnown RBP10.16□□□□□ -0.78
VCAN-210ENST00000513960 SNRPFP62306 86 aaKnown RBP10.16□□□□□ -0.78
VCAN-210ENST00000513960 GTF2BQ00403 316 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 KRT76Q01546 638 aa10.16□□□□□ -0.78
VCAN-210ENST00000513960 BBS9Q3SYG4 887 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms