RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 PPP1R10Q96QC0 940 aaKnown RBP13.67□□□□□ -0.22
PVT1-203ENST00000513868 TRAIPQ9BWF2 469 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 GOLGA2P5Q9HBQ8 144 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 AMFRQ9UKV5 643 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 BARX2Q9UMQ3 279 aaPredicted RBP13.67□□□□□ -0.22
PVT1-203ENST00000513868 PHF24Q9UPV7 400 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 KCNK3O14649 394 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 SPTLC1O15269 473 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 TLR3O15455 904 aaKnown RBP13.66□□□□□ -0.22
PVT1-203ENST00000513868 MMP8P22894 467 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 AFF1P51825 1210 aaKnown RBP13.66□□□□□ -0.22
PVT1-203ENST00000513868 NDST1P52848 882 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 ITIH3Q06033 890 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 C1QBPQ07021 282 aaKnown RBP13.66□□□□□ -0.22
PVT1-203ENST00000513868 DENND1BQ6P3S1 775 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 AGMOQ6ZNB7 445 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 GPR161Q8N6U8 529 aaKnown RBP13.66□□□□□ -0.22
PVT1-203ENST00000513868 TRIM11Q96F44 468 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 MRPL45Q9BRJ2 306 aaKnown RBP13.66□□□□□ -0.22
PVT1-203ENST00000513868 C11orf70Q9BRQ4 267 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 ANKZF1Q9H8Y5 726 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 ADAM22Q9P0K1 906 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 RNF14Q9UBS8 474 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 NOD1Q9Y239 953 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 SNX9Q9Y5X1 595 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 TCRBV5S1A1TA0A578 114 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 ZNF623O75123 536 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 CAND2O75155 1236 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 CKBP12277 381 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 LRPAP1P30533 357 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 TUBB4BP68371 445 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 PAK2Q13177 524 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 MESDQ14696 234 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 SOWAHAQ2M3V2 549 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 DCAF12L1Q5VU92 463 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 PLEKHA7Q6IQ23 1121 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 PPP1R2P3Q6NXS1 205 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 MMS22LQ6ZRQ5 1243 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 LIMS2Q7Z4I7 341 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 PHLDB2Q86SQ0 1253 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 CPNE8Q86YQ8 564 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 C1orf131Q8NDD1 294 aaKnown RBP13.66□□□□□ -0.22
PVT1-203ENST00000513868 SPATA4Q8NEY3 305 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 CAGE1Q8TC20 777 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 CD101Q93033 1021 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 LPPQ93052 612 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 PBKQ96KB5 322 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 TRIM7Q9C029 511 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 ZNF518BQ9C0D4 1074 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 UNC93B1Q9H1C4 597 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 LHX5Q9H2C1 402 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 STARD7Q9NQZ5 370 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 MIOSQ9NXC5 875 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 CYTH4Q9UIA0 394 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
PVT1-203ENST00000513868 TET1Q8NFU7 2136 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 ARVCFO00192 962 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 XPOTO43592 962 aaKnown RBP13.65□□□□□ -0.22
PVT1-203ENST00000513868 ITGA4P13612 1032 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 CD19P15391 556 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 H2AFXP16104 143 aaPredicted RBP13.65□□□□□ -0.22
PVT1-203ENST00000513868 ATF7P17544 494 aaPredicted RBP13.65□□□□□ -0.22
PVT1-203ENST00000513868 COMTP21964 271 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 MLH1P40692 756 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 CDK7P50613 346 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 C2orf54Q08AI8 447 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 MAMLD1Q13495 774 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 MBTPS1Q14703 1052 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 TTC39CQ8N584 583 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 TMEM35BQ8NCS4 154 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 MSANTD4Q8NCY6 345 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 GAD1Q99259 594 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 PAK6Q9NQU5 681 aaPredicted RBP13.65□□□□□ -0.22
PVT1-203ENST00000513868 GDAP2Q9NXN4 497 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 PTPN22Q9Y2R2 807 aa13.65□□□□□ -0.22
PVT1-203ENST00000513868 SCN5AQ14524 2016 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 A0A0U1RQF3 1178 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 A0A0U1RQG5 324 aaPredicted RBP13.64□□□□□ -0.23
PVT1-203ENST00000513868 TMEM110-MUSTN1A8MSY1 372 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 KPNA7A9QM74 516 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 O00370 1275 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 MED7O43513 233 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 VDRP11473 427 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 IGFBP6P24592 240 aaPredicted RBP13.64□□□□□ -0.23
PVT1-203ENST00000513868 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
PVT1-203ENST00000513868 CNGA2Q16280 664 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 CFAP221Q4G0U5 840 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 FBXO38Q6PIJ6 1188 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 RASGEF1CQ8N431 466 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 USP38Q8NB14 1042 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 KBTBD7Q8WVZ9 684 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 ALG3Q92685 438 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 NT5C1AQ9BXI3 368 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.64□□□□□ -0.23
PVT1-203ENST00000513868 GIT1Q9Y2X7 761 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 TSC2P49815 1807 aa13.64□□□□□ -0.23
PVT1-203ENST00000513868 ARL5CA6NH57 179 aa13.63□□□□□ -0.23
PVT1-203ENST00000513868 MICAL2O94851 1124 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms