RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 UBE3AQ05086 875 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 SMC1AQ14683 1233 aaKnown RBP12.14□□□□□ -0.47
HTT-213ENST00000513806 CTXN3Q4LDR2 81 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 TCEAL5Q5H9L2 206 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 PHLDB3Q6NSJ2 640 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 DPY19L2P1Q6NXN4 242 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 LLGL2Q6P1M3 1020 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 GBP6Q6ZN66 633 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 SPATA31D4Q6ZUB0 917 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 PALB2Q86YC2 1186 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 ADGRF2Q8IZF7 708 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 APPL2Q8NEU8 664 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 KLHL5Q96PQ7 755 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 TWNKQ96RR1 684 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 CLSTN3Q9BQT9 956 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 MRPL17Q9NRX2 175 aaKnown RBP12.14□□□□□ -0.47
HTT-213ENST00000513806 MTMR10Q9NXD2 777 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 GDAP2Q9NXN4 497 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 DDX43Q9NXZ2 648 aaKnown RBP12.14□□□□□ -0.47
HTT-213ENST00000513806 IFNKQ9P0W0 207 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 CDY1Q9Y6F8 540 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 C2orf16Q68DN1 1984 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 SYN3O14994 580 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 EPHB6O15197 1021 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 TEX28O15482 410 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 LINC01565O15544 149 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 STAU1O95793 577 aaKnown RBP12.13□□□□□ -0.47
HTT-213ENST00000513806 CAVIN2O95810 425 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 CYP11A1P05108 521 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 PNMA6AP0CW24 399 aaPredicted RBP12.13□□□□□ -0.47
HTT-213ENST00000513806 OR1D2P34982 312 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 NRIP1P48552 1158 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 TPM4P67936 248 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 PLCB2Q00722 1185 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 UBXN1Q04323 297 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 YWHAHQ04917 246 aaPredicted RBP12.13□□□□□ -0.47
HTT-213ENST00000513806 ELAVL2Q12926 359 aaKnown RBP12.13□□□□□ -0.47
HTT-213ENST00000513806 MRPL58Q14197 206 aaKnown RBP12.13□□□□□ -0.47
HTT-213ENST00000513806 SYCP1Q15431 976 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 ARHGAP44Q17R89 818 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 EXOC3L4Q17RC7 722 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 ZNF394Q53GI3 561 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 WDR44Q5JSH3 913 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 TRIM65Q6PJ69 517 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 LIMS2Q7Z4I7 341 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 LRRTM3Q86VH5 581 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 METTL23Q86XA0 190 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 PPM1KQ8N3J5 372 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 TOP6BLQ8N6T0 577 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 MRPL43Q8N983 215 aaKnown RBP12.13□□□□□ -0.47
HTT-213ENST00000513806 ANKRD20A12PQ8NF67 263 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 VN1R2Q8NFZ6 395 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 OR6B3Q8NGW1 331 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 PIK3R5Q8WYR1 880 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 KREMEN1Q96MU8 473 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 NT5C1BQ96P26 610 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 PGLYRP2Q96PD5 576 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 GAS2L1Q99501 681 aaPredicted RBP12.13□□□□□ -0.47
HTT-213ENST00000513806 IMPG2Q9BZV3 1241 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 NIF3L1Q9GZT8 377 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 VRTNQ9H8Y1 702 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
HTT-213ENST00000513806 TMLHEQ9NVH6 421 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 MTRRQ9UBK8 725 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
HTT-213ENST00000513806 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.13□□□□□ -0.47
HTT-213ENST00000513806 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 PMM2O15305 246 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 P4HA2O15460 535 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 TBC1D4O60343 1298 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 CLASP2O75122 1294 aaKnown RBP12.12□□□□□ -0.47
HTT-213ENST00000513806 TPM2P07951 284 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 FOSL2P15408 326 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 EPCAMP16422 314 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 TYMPP19971 482 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 HYAL1Q12794 435 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 CUL2Q13617 745 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 ZNF280DQ6N043 979 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 CCDC150Q8NCX0 1101 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 TAF4BQ92750 862 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
HTT-213ENST00000513806 BCO2Q9BYV7 579 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 RHOBTB2Q9BYZ6 727 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 XPO4Q9C0E2 1151 aaKnown RBP12.12□□□□□ -0.47
HTT-213ENST00000513806 ELOVL4Q9GZR5 314 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 LMAN2LQ9H0V9 348 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 SNX25Q9H3E2 840 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 UBE2TQ9NPD8 197 aaPredicted RBP12.12□□□□□ -0.47
HTT-213ENST00000513806 SIK3Q9Y2K2 1263 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 FHOD1Q9Y613 1164 aa12.12□□□□□ -0.47
HTT-213ENST00000513806 A0A1B0GTH6 734 aa12.11□□□□□ -0.47
HTT-213ENST00000513806 WDR27A2RRH5 827 aa12.11□□□□□ -0.47
HTT-213ENST00000513806 MYBPHLA2RUH7 354 aa12.11□□□□□ -0.47
HTT-213ENST00000513806 CARNS1A5YM72 827 aa12.11□□□□□ -0.47
HTT-213ENST00000513806 LRRC10BA6NIK2 292 aa12.11□□□□□ -0.47
HTT-213ENST00000513806 NOL4O94818 638 aa12.11□□□□□ -0.47
HTT-213ENST00000513806 OAZ2O95190 189 aa12.11□□□□□ -0.47
HTT-213ENST00000513806 VNN2O95498 520 aa12.11□□□□□ -0.47
HTT-213ENST00000513806 CPB1P15086 417 aa12.11□□□□□ -0.47
HTT-213ENST00000513806 WARSP23381 471 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms