RNA–Protein interactions for RNA: ENST00000513590.5

PACRGL-228, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-228ENST00000513590 HNRNPDQ14103 355 aaKnown RBP16.89■□□□□ 0.29
PACRGL-228ENST00000513590 SAFBQ15424 915 aaKnown RBP eCLIP16.89■□□□□ 0.29
PACRGL-228ENST00000513590 MAPK6Q16659 721 aa16.89■□□□□ 0.29
PACRGL-228ENST00000513590 RNF19BQ6ZMZ0 732 aa16.89■□□□□ 0.29
PACRGL-228ENST00000513590 PIK3AP1Q6ZUJ8 805 aa16.89■□□□□ 0.29
PACRGL-228ENST00000513590 APPL2Q8NEU8 664 aa16.89■□□□□ 0.29
PACRGL-228ENST00000513590 RPLP0P6Q8NHW5 317 aa16.89■□□□□ 0.29
PACRGL-228ENST00000513590 C2orf40Q9H1Z8 148 aa16.89■□□□□ 0.29
PACRGL-228ENST00000513590 SCUBE2Q9NQ36 999 aa16.89■□□□□ 0.29
PACRGL-228ENST00000513590 SLC38A7Q9NVC3 462 aa16.89■□□□□ 0.29
PACRGL-228ENST00000513590 SMC3Q9UQE7 1217 aa16.89■□□□□ 0.29
PACRGL-228ENST00000513590 SMIM28A0A1B0GU29 152 aa16.88■□□□□ 0.29
PACRGL-228ENST00000513590 FAM205CA6NFA0 338 aa16.88■□□□□ 0.29
PACRGL-228ENST00000513590 SLITRK3O94933 977 aa16.88■□□□□ 0.29
PACRGL-228ENST00000513590 LYPLA2O95372 231 aa16.88■□□□□ 0.29
PACRGL-228ENST00000513590 RUNX3Q13761 415 aa16.88■□□□□ 0.29
PACRGL-228ENST00000513590 CDCA2Q69YH5 1023 aaPredicted RBP16.88■□□□□ 0.29
PACRGL-228ENST00000513590 NEK8Q86SG6 692 aa16.88■□□□□ 0.29
PACRGL-228ENST00000513590 HDDC3Q8N4P3 179 aa16.88■□□□□ 0.29
PACRGL-228ENST00000513590 TSTD1Q8NFU3 115 aa16.88■□□□□ 0.29
PACRGL-228ENST00000513590 FOXP1Q9H334 677 aaPredicted RBP16.88■□□□□ 0.29
PACRGL-228ENST00000513590 ASB3Q9Y575 518 aa16.88■□□□□ 0.29
PACRGL-228ENST00000513590 ACKR2O00590 384 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 PRAMEF12O95522 483 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 GCFC2P16383 781 aaKnown RBP16.87■□□□□ 0.29
PACRGL-228ENST00000513590 ENGP17813 658 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 ALDH1A3P47895 512 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 ATXN3P54252 364 aaPredicted RBP16.87■□□□□ 0.29
PACRGL-228ENST00000513590 SOX4Q06945 474 aaPredicted RBP16.87■□□□□ 0.29
PACRGL-228ENST00000513590 EEF1DP3Q658K8 133 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 GAREM2Q75VX8 874 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 APBB1IPQ7Z5R6 666 aaPredicted RBP16.87■□□□□ 0.29
PACRGL-228ENST00000513590 INTS4Q96HW7 963 aaKnown RBP16.87■□□□□ 0.29
PACRGL-228ENST00000513590 SUSD3Q96L08 255 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 P2RY13Q9BPV8 354 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 FAM83CQ9BQN1 747 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 DNAJC25Q9H1X3 360 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 TASP1Q9H6P5 420 aa16.87■□□□□ 0.29
PACRGL-228ENST00000513590 URB1O60287 2271 aaKnown RBP16.87■□□□□ 0.29
PACRGL-228ENST00000513590 GON4LQ3T8J9 2241 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 LIG1P18858 919 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 GABRR2P28476 465 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 MARCKSP29966 332 aaPredicted RBP16.86■□□□□ 0.29
PACRGL-228ENST00000513590 DPP6P42658 865 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 RARRES1P49788 294 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 GALK1P51570 392 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 YARSP54577 528 aaKnown RBP16.86■□□□□ 0.29
PACRGL-228ENST00000513590 DNAJB7Q7Z6W7 309 aaPredicted RBP16.86■□□□□ 0.29
PACRGL-228ENST00000513590 BEST2Q8NFU1 509 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 HAS1Q92839 578 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 NAP1L4Q99733 375 aaKnown RBP16.86■□□□□ 0.29
PACRGL-228ENST00000513590 TPSD1Q9BZJ3 242 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 FBRSL1Q9HCM7 1045 aaKnown RBP16.86■□□□□ 0.29
PACRGL-228ENST00000513590 HPS4Q9NQG7 708 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 TOPORSQ9NS56 1045 aaPredicted RBP16.86■□□□□ 0.29
PACRGL-228ENST00000513590 RAXQ9Y2V3 346 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 BPTFQ12830 3046 aa16.86■□□□□ 0.29
PACRGL-228ENST00000513590 TNFRSF10BO14763 440 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 USO1O60763 962 aaKnown RBP16.85■□□□□ 0.29
PACRGL-228ENST00000513590 BCKDHBP21953 392 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 U2AF2P26368 475 aaKnown RBP eCLIP16.85■□□□□ 0.297e-11■■■■□ 26.7
PACRGL-228ENST00000513590 RPL9P32969 192 aaKnown RBP16.85■□□□□ 0.29
PACRGL-228ENST00000513590 MCM4P33991 863 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 MAEAQ7L5Y9 396 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 SYT12Q8IV01 421 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 CCDC26Q8TAB7 109 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 DDX12PQ92771 950 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 EIF2AK1Q9BQI3 630 aaKnown RBP16.85■□□□□ 0.29
PACRGL-228ENST00000513590 OXCT2Q9BYC2 517 aaPredicted RBP16.85■□□□□ 0.29
PACRGL-228ENST00000513590 EBF3Q9H4W6 596 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 GPRC5CQ9NQ84 441 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 USP20Q9Y2K6 914 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 THADAQ6YHU6 1953 aa16.85■□□□□ 0.29
PACRGL-228ENST00000513590 CCNT1O60563 726 aaKnown RBP16.84■□□□□ 0.29
PACRGL-228ENST00000513590 BAG4O95429 457 aaKnown RBP16.84■□□□□ 0.29
PACRGL-228ENST00000513590 FAM193AP78312 1265 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 DUSP4Q13115 394 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 PSMD2Q13200 908 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 SLC23A3Q6PIS1 610 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 CCNI2Q6ZMN8 369 aaPredicted RBP16.84■□□□□ 0.29
PACRGL-228ENST00000513590 LPCAT2Q7L5N7 544 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 ITIH5Q86UX2 942 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 HSCBQ8IWL3 235 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 SLFN12Q8IYM2 578 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 MCPH1Q8NEM0 835 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 ADAMTS14Q8WXS8 1223 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 PSMG2Q969U7 264 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 CHFRQ96EP1 664 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 CNOT6LQ96LI5 555 aaKnown RBP16.84■□□□□ 0.29
PACRGL-228ENST00000513590 PGLYRP2Q96PD5 576 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 HSD17B14Q9BPX1 270 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 CCDC94Q9BW85 323 aaPredicted RBP16.84■□□□□ 0.29
PACRGL-228ENST00000513590 ZMYM5Q9UJ78 669 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 ARID2Q68CP9 1835 aa16.84■□□□□ 0.29
PACRGL-228ENST00000513590 OTOL1A6NHN0 477 aaPredicted RBP16.83■□□□□ 0.28
PACRGL-228ENST00000513590 MAP3K13O43283 966 aa16.83■□□□□ 0.28
PACRGL-228ENST00000513590 OPHN1O60890 802 aa16.83■□□□□ 0.28
PACRGL-228ENST00000513590 XKR4Q5GH76 650 aa16.83■□□□□ 0.28
PACRGL-228ENST00000513590 LARP1BQ659C4 914 aaKnown RBP16.83■□□□□ 0.28
PACRGL-228ENST00000513590 ANO7Q6IWH7 933 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms