RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, human

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOBTB3-213	ENST00000512878	PYM1	Q9BRP8	204 aa	Known RBP	13.82	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	LRRC3	Q9BY71	257 aa		13.82	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SLC2A4RG	Q9NR83	387 aa		13.82	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	HSPBP1	Q9NZL4	362 aa		13.82	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	WNT16	Q9UBV4	365 aa		13.82	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SERTAD1	Q9UHV2	236 aa		13.82	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	HPSE	Q9Y251	543 aa		13.82	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	MRPS23	Q9Y3D9	190 aa	Known RBP	13.82	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	YIPF1	Q9Y548	306 aa		13.82	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	UBE4B	O95155	1302 aa		13.82	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	FAM186A	A6NE01	2351 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	FAM237A	A0A1B0GTK4	181 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878		A0A1B0GVL5	298 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	PVALEF	A0A1B0GWK0	134 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	KPNA7	A9QM74	516 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	KIAA0391	O15091	583 aa	Known RBP	13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	LRRN2	O75325	713 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	MICAL2	O94851	1124 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	PFKFB1	P16118	471 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	CMA1	P23946	247 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	POLR2B	P30876	1174 aa	Known RBP	13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	CLCN5	P51795	746 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	BMT2	Q1RMZ1	405 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	WSCD1	Q658N2	575 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	STXBP4	Q6ZWJ1	553 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	MTSS1L	Q765P7	747 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	LRRTM3	Q86VH5	581 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ATOH1	Q92858	354 aa	Predicted RBP	13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	PAGE5	Q96GU1	130 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	MTMR12	Q9C0I1	747 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ZCWPW1	Q9H0M4	648 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	TBC1D17	Q9HA65	648 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	AGPAT3	Q9NRZ7	376 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	INTS13	Q9NVM9	706 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	GDE1	Q9NZC3	331 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	DSE	Q9UL01	958 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SLC27A5	Q9Y2P5	690 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	NCAN	O14594	1321 aa		13.81	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ATG2B	Q96BY7	2078 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SOAT2	O75908	522 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	FCAR	P24071	287 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	KRT85	P78386	507 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SV2C	Q496J9	727 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	TMC8	Q8IU68	726 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	NELFCD	Q8IXH7	590 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	OR5B17	Q8NGF7	314 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	CACTIN	Q8WUQ7	758 aa	Known RBP	13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SPATA32	Q96LK8	384 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ZSWIM3	Q96MP5	696 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ZNF560	Q96MR9	790 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	PRRX2	Q99811	253 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	FOXQ1	Q9C009	403 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	GZF1	Q9H116	711 aa	Predicted RBP	13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SLC39A2	Q9NP94	309 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ARHGEF3	Q9NR81	526 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ITGA11	Q9UKX5	1188 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	AGAP1	Q9UPQ3	857 aa		13.8	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ZNF233	A6NK53	670 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	TULP1	O00294	542 aa	Predicted RBP	13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	STK25	O00506	426 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	CLIC2	O15247	247 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	DCN	P07585	359 aa	Known RBP	13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	PNPLA4	P41247	253 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	NUBP1	P53384	320 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	STK4	Q13043	487 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SNW1	Q13573	536 aa	Known RBP	13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SLC39A12	Q504Y0	691 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	TANGO2	Q6ICL3	276 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	PDZD4	Q76G19	769 aa	Predicted RBP	13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	C12orf56	Q8IXR9	622 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	CEP57L1	Q8IYX8	460 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	PDCL2	Q8N4E4	241 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	CSGALNACT2	Q8N6G5	542 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	LRRC52	Q8N7C0	313 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	KIAA0895	Q8NCT3	520 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	NOC3L	Q8WTT2	800 aa	Known RBP	13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ZNF512	Q96ME7	567 aa	Predicted RBP	13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	GDAP2	Q9NXN4	497 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	HSFX1	Q9UBD0	423 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	L1RE1	Q9UN81	338 aa		13.79	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	PTPRZ1	P23471	2315 aa	Predicted RBP	13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ZNF197	O14709	1029 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ECI2	O75521	394 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	MYL4	P12829	197 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	GLUL	P15104	373 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	ATF6	P18850	670 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	NDUFA8	P51970	172 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SNRPF	P62306	86 aa	Known RBP	13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	GRM2	Q14416	872 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	SNRNP35	Q16560	246 aa	Known RBP	13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	FAM78A	Q5JUQ0	283 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	CYP4A22	Q5TCH4	519 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	IQCE	Q6IPM2	695 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	LIMS2	Q7Z4I7	341 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	METTL23	Q86XA0	190 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	GPIHBP1	Q8IV16	184 aa		13.78	□□□□□ -0.2
RHOBTB3-213	ENST00000512878	CCDC105	Q8IYK2	499 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms