RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 GNAQP50148 359 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 AMHR2Q16671 573 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 BROXQ5VW32 411 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 PPP1R18Q6NYC8 613 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 SLC27A1Q6PCB7 646 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 HEATR3Q7Z4Q2 680 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 SRBD1Q8N5C6 995 aaKnown RBP10.35□□□□□ -0.75
CLCN3-208ENST00000512813 CCDC33Q8N5R6 958 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 RNF149Q8NC42 400 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 SMG9Q9H0W8 520 aaKnown RBP10.35□□□□□ -0.75
CLCN3-208ENST00000512813 TASP1Q9H6P5 420 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 TM7SF3Q9NS93 570 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 SEPT3Q9UH03 358 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 FBXL5Q9UKA1 691 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 MAN2B2Q9Y2E5 1009 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 H7C4K7 107 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 K7EQS6 105 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 BRINP1O60477 761 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 CILPO75339 1184 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 DDAH1O94760 285 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 CER1O95813 267 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 GNSP15586 552 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 BRCC3P46736 316 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 CLK2P49760 499 aaKnown RBP10.34□□□□□ -0.75
CLCN3-208ENST00000512813 ADCY7P51828 1080 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 PTENP60484 403 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 SART3Q15020 963 aaKnown RBP10.34□□□□□ -0.75
CLCN3-208ENST00000512813 PDGFRLQ15198 375 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 TBC1D25Q3MII6 688 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 ANO5Q75V66 913 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 CPA6Q8N4T0 437 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 DEFB119Q8N690 84 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLCN3-208ENST00000512813 ZNF248Q8NDW4 579 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 C3orf58Q8NDZ4 430 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 OXER1Q8TDS5 423 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 HMGB4Q8WW32 186 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 SLC7A3Q8WY07 619 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 HSPA12BQ96MM6 686 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 CHMP4BQ9H444 224 aaKnown RBP10.34□□□□□ -0.75
CLCN3-208ENST00000512813 IL21RQ9HBE5 538 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 BTBD3Q9Y2F9 522 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 FNDC3AQ9Y2H6 1198 aaKnown RBP10.34□□□□□ -0.75
CLCN3-208ENST00000512813 OTOGQ6ZRI0 2925 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 NID2Q14112 1375 aa10.34□□□□□ -0.75
CLCN3-208ENST00000512813 NBASA2RRP1 2371 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 hCG_1642624A0A1W2PR95 340 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 SYN3O14994 580 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 CHMP2AO43633 222 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 MS4A1P11836 297 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 JUPP14923 745 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 GABRR2P28476 465 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 CLCNKBP51801 687 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 SEC13P55735 322 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 MRPS21P82921 87 aaKnown RBP10.33□□□□□ -0.76
CLCN3-208ENST00000512813 CYP4A11Q02928 519 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 MRPL58Q14197 206 aaKnown RBP10.33□□□□□ -0.76
CLCN3-208ENST00000512813 UPP1Q16831 310 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 HSF5Q4G112 596 aaPredicted RBP10.33□□□□□ -0.76
CLCN3-208ENST00000512813 CCDC157Q569K6 752 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 WWC2Q6AWC2 1192 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 TYW1BQ6NUM6 668 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 CDR2LQ86X02 465 aaPredicted RBP10.33□□□□□ -0.76
CLCN3-208ENST00000512813 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
CLCN3-208ENST00000512813 ZNF654Q8IZM8 581 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 CMTM8Q8IZV2 173 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 TRIML1Q8N9V2 468 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 BEST2Q8NFU1 509 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 RDM1Q8NG50 284 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 TMEM143Q96AN5 459 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 LENG9Q96B70 501 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 UROC1Q96N76 676 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 LPIN3Q9BQK8 851 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 CXCL16Q9H2A7 254 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 DHX33Q9H6R0 707 aaKnown RBP10.33□□□□□ -0.76
CLCN3-208ENST00000512813 GAREM1Q9H706 876 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 ECT2Q9H8V3 914 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 KIF9Q9HAQ2 790 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 ZMYM5Q9UJ78 669 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 ASB3Q9Y575 518 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 ICE1Q9Y2F5 2266 aa10.33□□□□□ -0.76
CLCN3-208ENST00000512813 ANK1P16157 1881 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 A0A1B0GUA9 196 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 ESYT2A0FGR8 921 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 ANTXRLA6NF34 631 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 DDX11L8A8MPP1 907 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 INO80B-WBP1J3KQ70 363 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 ASAP2O43150 1006 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 SUV39H1O43463 412 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 RECQL4O94761 1208 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 VNN2O95498 520 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 CHRM1P11229 460 aaPredicted RBP10.32□□□□□ -0.76
CLCN3-208ENST00000512813 MATKP42679 507 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 USP11P51784 963 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 EPHB3P54753 998 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 NAPAP54920 295 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 CYP4F8P98187 520 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 MBTD1Q05BQ5 628 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 VAC14Q08AM6 782 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 CTXN3Q4LDR2 81 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms