RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 HSPA1AP0DMV8 641 aaKnown RBP13.04□□□□□ -0.32
COL11A1-210ENST00000512756 HSPA1BP0DMV9 641 aaKnown RBP13.04□□□□□ -0.32
COL11A1-210ENST00000512756 HIST1H2ADP20671 130 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 PON1P27169 355 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 SV2CQ496J9 727 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 RRM2BQ7LG56 351 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 EFL1Q7Z2Z2 1120 aaKnown RBP13.04□□□□□ -0.32
COL11A1-210ENST00000512756 CHST13Q8NET6 341 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 CASKIN2Q8WXE0 1202 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 HIST1H2AHQ96KK5 128 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 PNKPQ96T60 521 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 HIST1H2AJQ99878 128 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 SH3GL3Q99963 347 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 H2AFJQ9BTM1 129 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 THAP2Q9H0W7 228 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.04□□□□□ -0.32
COL11A1-210ENST00000512756 MOSPD1Q9UJG1 213 aa13.04□□□□□ -0.32
COL11A1-210ENST00000512756 ATMINO43313 823 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 HNRNPRO43390 633 aaKnown RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 SLC25A27O95847 323 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 HOXD10P28358 340 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 MRPS35P82673 323 aaKnown RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 ACCSLQ4AC99 568 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 ZC3H12BQ5HYM0 836 aaKnown RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 MDH1BQ5I0G3 518 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 TTI2Q6NXR4 508 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 GTF3C2Q8WUA4 911 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 THAP11Q96EK4 314 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 TMA16Q96EY4 203 aaKnown RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 GJD4Q96KN9 370 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 AFF4Q9UHB7 1163 aaKnown RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 A0A0G2JLW4 131 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 HBP1O60381 514 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 ZC3H11AO75152 810 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 DCUN1D1Q96GG9 259 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 ZMAT2Q96NC0 199 aaKnown RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 CATSPERBQ9H7T0 1116 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 SLC40A1Q9NP59 571 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 C20orf96Q9NUD7 363 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 MSH4O15457 936 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 NDUFS3O75489 264 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 APOA4P06727 396 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 PCSK1P29120 753 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 NEK2P51955 445 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 KRT72Q14CN4 511 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 NAPEPLDQ6IQ20 393 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 SH3KBP1Q96B97 665 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 GZMAP12544 262 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 ITIH4Q14624 930 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 BTNL9Q6UXG8 535 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 ACTRT1Q8TDG2 376 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 L1RE1Q9UN81 338 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 ARHGEF9O43307 516 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 AKAP10O43572 662 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 PLEKP08567 350 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 KCNA3P22001 575 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 PCYT1AP49585 367 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 CUL2Q13617 745 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 TRIP10Q15642 601 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 DCAF4L1Q3SXM0 396 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 AASDHQ4L235 1098 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-210ENST00000512756 MFN1Q8IWA4 741 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 FUCA2Q9BTY2 467 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 GID8Q9NWU2 228 aa13.03□□□□□ -0.32
COL11A1-210ENST00000512756 A0A0A6YYK5 440 aaPredicted RBP13.02□□□□□ -0.32
COL11A1-210ENST00000512756 CSPG5O95196 566 aa13.02□□□□□ -0.32
COL11A1-210ENST00000512756 RARGP13631 454 aa13.02□□□□□ -0.32
COL11A1-210ENST00000512756 CCNJLQ8IV13 435 aa13.02□□□□□ -0.32
COL11A1-210ENST00000512756 WHRNQ9P202 907 aa13.02□□□□□ -0.32
COL11A1-210ENST00000512756 GTPBP10A4D1E9 387 aaKnown RBP13.02□□□□□ -0.33
COL11A1-210ENST00000512756 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.33
COL11A1-210ENST00000512756 IGF2BP3O00425 579 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL11A1-210ENST00000512756 FDFT1P37268 417 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 PLA2G4AP47712 749 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 PTK6Q13882 451 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 THEMIS2Q5TEJ8 643 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 RAB42Q8N4Z0 105 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 SLC30A1Q9Y6M5 507 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 SLC37A4O43826 429 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 DEAF1O75398 565 aaPredicted RBP13.02□□□□□ -0.33
COL11A1-210ENST00000512756 RARBP10826 455 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 CDKAL1Q5VV42 579 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 GJB7Q6PEY0 223 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 MICALL2Q8IY33 904 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL11A1-210ENST00000512756 ADCY3O60266 1144 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 PDGFRBP09619 1106 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 PNPLA4P41247 253 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 COBLL1Q53SF7 1204 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 C6orf10Q5SRN2 563 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 CENPPQ6IPU0 288 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 LINC00523Q86TU6 105 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 ERAP1Q9NZ08 941 aa13.02□□□□□ -0.33
COL11A1-210ENST00000512756 AIM2O14862 343 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 SYF2O95926 243 aaKnown RBP13.01□□□□□ -0.33
COL11A1-210ENST00000512756 KDELC2Q7Z4H8 507 aa13.01□□□□□ -0.33
COL11A1-210ENST00000512756 SAMD3Q8N6K7 520 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms