RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 DNAH12Q6ZR08 3092 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 MROH7Q68CQ1 1323 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 ZNF318Q5VUA4 2279 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 XIRP2A4UGR9 3374 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 DDX3YO15523 660 aaKnown RBP13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 CEP104O60308 925 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 DUSP11O75319 330 aaKnown RBP13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 CLSTN1O94985 981 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 CST3P01034 146 aaPredicted RBP13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 RPLP2P05387 115 aaKnown RBP13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 CXCL8P10145 99 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 P4HA1P13674 534 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 AKR1A1P14550 325 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 RAG1P15918 1043 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 CTNNA2P26232 953 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 HOXC8P31273 242 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 NSFP46459 744 aaKnown RBP13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 NKX3-2P78367 333 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 RAB30Q15771 203 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 LONRF2Q1L5Z9 754 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 LIN9Q5TKA1 542 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 C8orf74Q6P047 294 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 HDXQ7Z353 690 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 DNAAF5Q86Y56 855 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 MCOLN2Q8IZK6 566 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 NME8Q8N427 588 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 EIF1ADQ8N9N8 165 aaKnown RBP13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 ZNF564Q8TBZ8 553 aaPredicted RBP13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 HLA-CQ95604 372 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 ZBTB10Q96DT7 871 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 FAM212AQ96EL1 285 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 ACAP3Q96P50 834 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 PSMB7Q99436 277 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 NUP85Q9BW27 656 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 SLC28A3Q9HAS3 691 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 SETD4Q9NVD3 440 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 CNOT8Q9UFF9 292 aaKnown RBP13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 ITGA11Q9UKX5 1188 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 PACSIN2Q9UNF0 486 aaPredicted RBP13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 ALG6Q9Y672 507 aa13.97□□□□□ -0.17
DEPDC1B-206ENST00000512452 ANK1P16157 1881 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 CCDC66A2RUB6 948 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 LACTBL1A8MY62 500 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 MAP2K7O14733 419 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 GPR32O75388 356 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 PAEPP09466 180 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 CYP2C9P11712 490 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 CYP2C19P33261 490 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 SLC1A1P43005 524 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 NOMO3P69849 1222 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 TMEM132DQ14C87 1099 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 SNX17Q15036 470 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 ZNF667Q5HYK9 610 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 PRAMEF19Q5SWL8 479 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 SLC27A1Q6PCB7 646 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 MON1BQ7L1V2 547 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 KRT222Q8N1A0 295 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 PRSS33Q8NF86 280 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 MS4A14Q96JA4 679 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 FAM84AQ96KN4 292 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 BCO2Q9BYV7 579 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 NKX2-4Q9H2Z4 354 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 MRPL47Q9HD33 250 aaKnown RBP13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 ACP6Q9NPH0 428 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 RBM12Q9NTZ6 932 aaKnown RBP13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 STIM2Q9P246 746 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 PCDHGC3Q9UN70 934 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 L1RE1Q9UN81 338 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 SCINQ9Y6U3 715 aa13.96□□□□□ -0.17
DEPDC1B-206ENST00000512452 PTPRZ1P23471 2315 aaPredicted RBP13.96□□□□□ -0.18
DEPDC1B-206ENST00000512452 UMODL1Q5DID0 1318 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 WDFY4Q6ZS81 3184 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 A0A0U1RQG5 324 aaPredicted RBP13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 THAP12O43422 761 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 MED7O43513 233 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 DARSP14868 501 aaKnown RBP13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 CDH5P33151 784 aaPredicted RBP13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 ASPAP45381 313 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 ID4P47928 161 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 FSCN1Q16658 493 aaKnown RBP13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 SLC10A6Q3KNW5 377 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 MFSD14CQ5VZR4 134 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 NOTUMQ6P988 496 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 CCNI2Q6ZMN8 369 aaPredicted RBP13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 CEP120Q8N960 986 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 ZNF606Q8WXB4 792 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 ZNF668Q96K58 619 aaPredicted RBP13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 ZSWIM1Q9BR11 485 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 PLVAPQ9BX97 442 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 FUT8Q9BYC5 575 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 UPF3AQ9H1J1 476 aaKnown RBP13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 ACBD3Q9H3P7 528 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 SLITRK6Q9H5Y7 841 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 VIPAS39Q9H9C1 493 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 CISHQ9NSE2 258 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 SIX4Q9UIU6 781 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 NOC2LQ9Y3T9 749 aaKnown RBP13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 KAT6AQ92794 2004 aa13.95□□□□□ -0.18
DEPDC1B-206ENST00000512452 C17orf102A2RUQ5 167 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms