RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 HINFPQ9BQA5 517 aa15.9■□□□□ 0.14
CCHCR1-229ENST00000512418 STRA6Q9BX79 667 aa15.9■□□□□ 0.14
CCHCR1-229ENST00000512418 PRMT8Q9NR22 394 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-229ENST00000512418 DPP3Q9NY33 737 aa15.9■□□□□ 0.14
CCHCR1-229ENST00000512418 NDRG2Q9UN36 371 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-229ENST00000512418 EXOC7Q9UPT5 735 aa15.9■□□□□ 0.14
CCHCR1-229ENST00000512418 PIAS3Q9Y6X2 628 aa15.9■□□□□ 0.14
CCHCR1-229ENST00000512418 OTOGLQ3ZCN5 2332 aa15.9■□□□□ 0.14
CCHCR1-229ENST00000512418 DMXL1Q9Y485 3027 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 ARNTLO00327 626 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 CYB561D2O14569 222 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 SOAT2O75908 522 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 IL18RAPO95256 599 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 TUFMP49411 452 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 SMARCB1Q12824 385 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 VEPH1Q14D04 833 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 L1TD1Q5T7N2 865 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 FAM173BQ6P4H8 233 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 CCDC73Q6ZRK6 1079 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 GAREM2Q75VX8 874 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 DNAJB7Q7Z6W7 309 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 YAF2Q8IY57 180 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 EFCAB13Q8IY85 973 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 THEM5Q8N1Q8 247 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 SUMF1Q8NBK3 374 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 ZBTB44Q8NCP5 570 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 C2orf15Q8WU43 125 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 ATRIPQ8WXE1 791 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 FAM3CQ92520 227 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 DNAJC19Q96DA6 116 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 MSANTD3Q96H12 275 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 SEPT5Q99719 369 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 PYM1Q9BRP8 204 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 IER2Q9BTL4 223 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 ZCWPW1Q9H0M4 648 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 IKZF4Q9H2S9 585 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 OLFML3Q9NRN5 406 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 ZSCAN32Q9NX65 697 aa15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 MORC2Q9Y6X9 1032 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-229ENST00000512418 CHADO15335 359 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 GCNT3O95395 438 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 GABRR2P28476 465 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 MLLT6P55198 1093 aaPredicted RBP15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 CEBPZQ03701 1054 aaKnown RBP15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 KCNA1Q09470 495 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 FCHO2Q0JRZ9 810 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 MTAPQ13126 283 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 MGAT5BQ3V5L5 792 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 SV2CQ496J9 727 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 ARHGAP15Q53QZ3 475 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 STXBP5Q5T5C0 1151 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 C1orf228Q6PIY5 440 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 ERMP1Q7Z2K6 904 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 ARID3BQ8IVW6 561 aaPredicted RBP15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 SPPL2BQ8TCT7 592 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 CSGALNACT1Q8TDX6 532 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 NELL1Q92832 810 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 RSPRY1Q96DX4 576 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 INTS4Q96HW7 963 aaKnown RBP15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 ZNF560Q96MR9 790 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 ACCSQ96QU6 501 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 MKNK1Q9BUB5 465 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 FAM126AQ9BYI3 521 aaPredicted RBP15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 CHRDQ9H2X0 955 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 ATXN3LQ9H3M9 355 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 TBC1D7Q9P0N9 293 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 NUP210Q8TEM1 1887 aaPredicted RBP15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 TCHHQ07283 1943 aa15.88■□□□□ 0.13
CCHCR1-229ENST00000512418 KPNA7A9QM74 516 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 IDEP14735 1019 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 ATF6P18850 670 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 PNPLA4P41247 253 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 STAT6P42226 847 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 ALCAMQ13740 583 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 PPP2R5DQ14738 602 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 WSCD1Q658N2 575 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 MAMSTRQ6ZN01 415 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 BRSK2Q8IWQ3 736 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 KIAA2013Q8IYS2 634 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 FAM200AQ8TCP9 573 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 GCNAQ96QF7 691 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 LPIN3Q9BQK8 851 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 FAM213AQ9BRX8 229 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 OBP2AQ9NY56 170 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 PCDHB13Q9Y5F0 798 aa15.87■□□□□ 0.13
CCHCR1-229ENST00000512418 FRMD3A2A2Y4 597 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 DPYSL4O14531 572 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 LILRB5O75023 590 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 LDHAP00338 332 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 GARTP22102 1010 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 CCNE1P24864 410 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 WEE1P30291 646 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 CDC25CP30307 473 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 CASP5P51878 434 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 SLC39A14Q15043 492 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 GPR158Q5T848 1215 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 TSSK4Q6SA08 328 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 DCP1BQ8IZD4 617 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 SAAL1Q96ER3 474 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 USP28Q96RU2 1077 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms