RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 FRMD8P1Q9BZ68 369 aaPredicted RBP9.77□□□□□ -0.85
CPNE4-210ENST00000512332 LHX5Q9H2C1 402 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 PPCSQ9HAB8 311 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 PTPRHQ9HD43 1115 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 FZD1Q9UP38 647 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 USTQ9Y2C2 406 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 A0A0G2JMZ2 1700 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 DNALI1O14645 258 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 OAS1P00973 400 aaKnown RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 ITGAVP06756 1048 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 VIMP08670 466 aaKnown RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 TNFSF9P41273 254 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 MAGEA4P43358 317 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 LAMTOR4Q0VGL1 99 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 MORF4L2Q15014 288 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 TFDP3Q5H9I0 405 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 SPOCD1Q6ZMY3 1216 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 GSTA5Q7RTV2 222 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 WDTC1Q8N5D0 677 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 FNIP1Q8TF40 1166 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 CKAP2Q8WWK9 683 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 CFAP57Q96MR6 1250 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 RBM15Q96T37 977 aaKnown RBP eCLIP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 MPHOSPH6Q99547 160 aaKnown RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 PLCD4Q9BRC7 762 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 TCHPQ9BT92 498 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 PHACTR1Q9C0D0 580 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 MTMR12Q9C0I1 747 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 MTFR1LQ9H019 292 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 SPATC1LQ9H0A9 340 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 XYLT2Q9H1B5 865 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 SLC40A1Q9NP59 571 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 KLC4Q9NSK0 619 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 GGA3Q9NZ52 723 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 BTBD7Q9P203 1132 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 NAALADL1Q9UQQ1 740 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 CEP83Q9Y592 693 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 CD2APQ9Y5K6 639 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 SNCAIPQ9Y6H5 919 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 TTLL13PA6NNM8 815 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 ACKR2O00590 384 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 PRKCBP05771 671 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 HOXC6P09630 235 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 BRAFP15056 766 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 POLR2BP30876 1174 aaKnown RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 CDKN2BP42772 138 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 SSR1P43307 286 aaKnown RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 SLC26A2P50443 739 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 VCPP55072 806 aaKnown RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 GSCP56915 257 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 MKRN4PQ13434 485 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 TRPC3Q13507 836 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 OASLQ15646 514 aaKnown RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 SPRED3Q2MJR0 410 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 P3H1Q32P28 736 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 CCDC38Q502W7 563 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 DCUN1D2Q6PH85 259 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 MFSD7Q6UXD7 560 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 PPP1R21Q6ZMI0 780 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 ARHGEF18Q6ZSZ5 1173 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 ERICH1Q86X53 443 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 TRPM4Q8TD43 1214 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 MAML1Q92585 1016 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 ELAC2Q9BQ52 826 aaKnown RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 FZD8Q9H461 694 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 UBN1Q9NPG3 1134 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 DNPEPQ9ULA0 475 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 TPX2Q9ULW0 747 aaKnown RBP9.76□□□□□ -0.85
CPNE4-210ENST00000512332 SLC12A4Q9UP95 1085 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 WDR90Q96KV7 1748 aa9.76□□□□□ -0.85
CPNE4-210ENST00000512332 hCG_1818297A0A087WSY0 165 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 SIGLEC16A6NMB1 481 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 ZBTB42B2RXF5 422 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 F8VP50 259 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 IRF6O14896 467 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 MED7O43513 233 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 KRT1P04264 644 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 ASPAP45381 313 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 VPS41P49754 854 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 OGDHQ02218 1023 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 VGLL4Q14135 290 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 ATP13A4Q4VNC1 1196 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 SEZ6Q53EL9 994 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 TREML2Q5T2D2 321 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 GPAT2Q6NUI2 795 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 MPZL3Q6UWV2 235 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 TRPM8Q7Z2W7 1104 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 FUKQ8N0W3 1084 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 GBP7Q8N8V2 638 aaPredicted RBP9.75□□□□□ -0.85
CPNE4-210ENST00000512332 RNF149Q8NC42 400 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 DYDC1Q8WWB3 177 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 SGSM3Q96HU1 749 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 MCEEQ96PE7 176 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 GPR20Q99678 358 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 WDR35Q9P2L0 1181 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 SHOC2Q9UQ13 582 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 ZNF148Q9UQR1 794 aa9.75□□□□□ -0.85
CPNE4-210ENST00000512332 USP15Q9Y4E8 981 aaPredicted RBP9.75□□□□□ -0.85
CPNE4-210ENST00000512332 ALOX15BO15296 676 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms