RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 FASTKD1Q53R41 847 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 APOBEC3HQ6NTF7 200 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 TTC39CQ8N584 583 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 C4orf32Q8N8J7 132 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 FAM111AQ96PZ2 611 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.45□□□□□ -1.06
NEK1-208ENST00000512193 TAS2R14Q9NYV8 317 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 HAO1Q9UJM8 370 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 PHTF1Q9UMS5 762 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 PROSCO94903 275 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 ZFXP17010 805 aaPredicted RBP8.44□□□□□ -1.06
NEK1-208ENST00000512193 TRADDQ15628 312 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 BTNL9Q6UXG8 535 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 PACS2Q86VP3 889 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 RASSF3Q86WH2 238 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 CCDC33Q8N5R6 958 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 EMC1Q8N766 993 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 ARMC2Q8NEN0 867 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 SYTL5Q8TDW5 730 aaPredicted RBP8.44□□□□□ -1.06
NEK1-208ENST00000512193 PDCD2LQ9BRP1 358 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 GCOM2Q9BZD3 368 aaPredicted RBP8.44□□□□□ -1.06
NEK1-208ENST00000512193 FAM96AQ9H5X1 160 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 RSAD1Q9HA92 442 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 C17orf75Q9HAS0 396 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 SLC4A7Q9Y6M7 1214 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 ENO4A6NNW6 628 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 TAC1P20366 129 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 HIC1Q14526 733 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 MORF4L2Q15014 288 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 PPIL6Q8IXY8 311 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 KIRREL3Q8IZU9 778 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 RIBC1Q8N443 379 aaPredicted RBP8.44□□□□□ -1.06
NEK1-208ENST00000512193 MTBPQ96DY7 904 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 CENPKQ9BS16 269 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 SHCBP1LQ9BZQ2 653 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 MANSC1Q9H8J5 431 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 ELP3Q9H9T3 547 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 MYOZ2Q9NPC6 264 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 WHRNQ9P202 907 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 NAALADL1Q9UQQ1 740 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 CLGNO14967 610 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 BNIP3LO60238 219 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 GEMIN4P57678 1058 aaKnown RBP8.44□□□□□ -1.06
NEK1-208ENST00000512193 OTUD4Q01804 1114 aaKnown RBP8.44□□□□□ -1.06
NEK1-208ENST00000512193 PPATQ06203 517 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 CYP24A1Q07973 514 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 TMEM259Q4ZIN3 620 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 GMCL1P1Q8NEA9 526 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 ABTB1Q969K4 478 aaPredicted RBP8.44□□□□□ -1.06
NEK1-208ENST00000512193 NT5C1AQ9BXI3 368 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 PAK5Q9P286 719 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 MYO5BQ9ULV0 1848 aa8.44□□□□□ -1.06
NEK1-208ENST00000512193 SPDYE2BA6NHP3 402 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 C19orf81C9J6K1 198 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 ITGB3P05106 788 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 SPDYE6P0CI01 402 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 NQO1P15559 274 aaKnown RBP8.43□□□□□ -1.06
NEK1-208ENST00000512193 EFCAB12Q6NXP0 572 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 LRRC6Q86X45 466 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 ACTL9Q8TC94 416 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 PRPF31Q8WWY3 499 aaKnown RBP8.43□□□□□ -1.06
NEK1-208ENST00000512193 GPRASP2Q96D09 838 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 CCDC138Q96M89 665 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 SMARCAD1Q9H4L7 1026 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 HEY2Q9UBP5 337 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 RIPK2O43353 540 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 CALCAP01258 141 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 PAMP19021 973 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 ATXN3P54252 364 aaPredicted RBP8.43□□□□□ -1.06
NEK1-208ENST00000512193 KLC1Q07866 573 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 PPP3CAQ08209 521 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 IER5Q5VY09 327 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 C11orf63Q6NUN7 778 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 NLRP9Q7RTR0 991 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 PTF1AQ7RTS3 328 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 NOP9Q86U38 636 aaKnown RBP8.43□□□□□ -1.06
NEK1-208ENST00000512193 C3orf20Q8ND61 904 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 TMC2Q8TDI7 906 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 USP33Q8TEY7 942 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 HPDLQ96IR7 371 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 FGD4Q96M96 766 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 TRPV6Q9H1D0 765 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 IKZF4Q9H2S9 585 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 THEGQ9P2T0 379 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 TRIM33Q9UPN9 1127 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 PIN4Q9Y237 131 aaKnown RBP8.43□□□□□ -1.06
NEK1-208ENST00000512193 ZNF263O14978 683 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 OGTO15294 1046 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 PSTPIP1O43586 416 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 CSDE1O75534 798 aaKnown RBP8.43□□□□□ -1.06
NEK1-208ENST00000512193 GJB6O95452 261 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 S100BP04271 92 aaPredicted RBP8.43□□□□□ -1.06
NEK1-208ENST00000512193 HSPA8P11142 646 aaKnown RBP8.43□□□□□ -1.06
NEK1-208ENST00000512193 GPD1P21695 349 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 MUTP22033 750 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 GARTP22102 1010 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 RFC5P40937 340 aa8.43□□□□□ -1.06
NEK1-208ENST00000512193 GMPSP49915 693 aaPredicted RBP8.43□□□□□ -1.06
NEK1-208ENST00000512193 NLRP11P59045 1033 aaKnown RBP8.43□□□□□ -1.06
NEK1-208ENST00000512193 MYL6P60660 151 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms