RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 MLXIPLQ9NP71 852 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 IPPQ9Y573 584 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 PARP4Q9UKK3 1724 aaKnown RBP11.36□□□□□ -0.59
CPNE4-209ENST00000512055 FAM95CA0A1B0GW59 222 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 ATP6V1B1P15313 513 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 AARSP49588 968 aaKnown RBP eCLIP11.36□□□□□ -0.59
CPNE4-209ENST00000512055 TMEM119Q4V9L6 283 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 TMEM165Q9HC07 324 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 FAM8A1Q9UBU6 413 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 NAGPAQ9UK23 515 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 H2AFXP16104 143 aaPredicted RBP11.36□□□□□ -0.59
CPNE4-209ENST00000512055 SURF1Q15526 300 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 FIGNQ5HY92 759 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 ARHGAP22Q7Z5H3 698 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 OTULINQ96BN8 352 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 DIS3Q9Y2L1 958 aaKnown RBP11.36□□□□□ -0.59
CPNE4-209ENST00000512055 PRG3Q9Y2Y8 225 aaPredicted RBP11.36□□□□□ -0.59
CPNE4-209ENST00000512055 CPP00450 1065 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 SPARCL1Q14515 664 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 RSBN1Q5VWQ0 802 aaPredicted RBP11.36□□□□□ -0.59
CPNE4-209ENST00000512055 NLRP14Q86W24 1093 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 DNAJC9Q8WXX5 260 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 HSPH1Q92598 858 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 MMP19Q99542 508 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 TRIM51Q9BSJ1 452 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 TTC7AQ9ULT0 858 aaPredicted RBP11.36□□□□□ -0.59
CPNE4-209ENST00000512055 PCDHGA3Q9Y5H0 932 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 CFAP69A5D8W1 941 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 LRRC10BA6NIK2 292 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 A6NJR5 290 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 C19orf81C9J6K1 198 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 PODXLO00592 558 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 CRYMQ14894 314 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 CCDC137Q6PK04 289 aaKnown RBP11.35□□□□□ -0.59
CPNE4-209ENST00000512055 CATSPER4Q7RTX7 472 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 HACE1Q8IYU2 909 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 MPP4Q96JB8 637 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 MKNK1Q9BUB5 465 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 MRPL4Q9BYD3 311 aaKnown RBP11.35□□□□□ -0.59
CPNE4-209ENST00000512055 NGRNQ9NPE2 291 aaKnown RBP11.35□□□□□ -0.59
CPNE4-209ENST00000512055 TMEM150BA6NC51 233 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 RTN2O75298 545 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 FAM200BP0CF97 657 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 GPC3P51654 580 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 EIF3BP55884 814 aaKnown RBP11.35□□□□□ -0.59
CPNE4-209ENST00000512055 AMIGO3Q86WK7 504 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 SH2D3CQ8N5H7 860 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 CALML6Q8TD86 181 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 FOXN3O00409 490 aaPredicted RBP11.35□□□□□ -0.59
CPNE4-209ENST00000512055 WNT10BO00744 389 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 TOMM70O94826 608 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 COPB2P35606 906 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 EMC2Q15006 297 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 MAPRE1Q15691 268 aaKnown RBP11.35□□□□□ -0.59
CPNE4-209ENST00000512055 C4orf32Q8N8J7 132 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 RTL3Q8N8U3 475 aaKnown RBP11.35□□□□□ -0.59
CPNE4-209ENST00000512055 SYN2Q92777 582 aaPredicted RBP11.35□□□□□ -0.59
CPNE4-209ENST00000512055 PCSK1NQ9UHG2 260 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 FZD1Q9UP38 647 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 GOLGA8TH3BQL2 631 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 ADAMTS3O15072 1205 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 PAPOLAP51003 745 aaKnown RBP11.35□□□□□ -0.59
CPNE4-209ENST00000512055 CBWD2Q8IUF1 395 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 NSMCE4AQ9NXX6 385 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 AURKCQ9UQB9 309 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 RGPD5Q99666 1765 aa11.35□□□□□ -0.59
CPNE4-209ENST00000512055 DISP2A7MBM2 1401 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 KDM3BQ7LBC6 1761 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 RAD51CO43502 376 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 TXNP10599 105 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 IMPDH2P12268 514 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 CIITAP33076 1130 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 SOX10P56693 466 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 TTLL4Q14679 1199 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 DARS2Q6PI48 645 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 C11orf88Q6PI97 169 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 ZNF720Q7Z2F6 126 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 NOL6Q9H6R4 1146 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 PAPOLBQ9NRJ5 636 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 KLHL11Q9NVR0 708 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 USE1Q9NZ43 259 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 PNMA3Q9UL41 463 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 C16orf96A6NNT2 1141 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 SLITRK3O94933 977 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 MAGOHP61326 146 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 C16orf72Q14CZ0 275 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 SEZ6Q53EL9 994 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 OR6B3Q8NGW1 331 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 FAM210AQ96ND0 272 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 AP5M1Q9H0R1 490 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 ABCF3Q9NUQ8 709 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 ETAA1Q9NY74 926 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 IPO11Q9UI26 975 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 RGS20O76081 388 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 BBS9Q3SYG4 887 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 ARHGAP17Q68EM7 881 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 SPATA20Q8TB22 786 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 MMTAG2Q9BU76 263 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 TIPINQ9BVW5 301 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms