RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 GTF2A2P52657 109 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 HDLBPQ00341 1268 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 EXOSC10Q01780 885 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 NNTQ13423 1086 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 MAPRE1Q15691 268 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 TRIM71Q2Q1W2 868 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 QRICH1Q2TAL8 776 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PREPLQ4J6C6 727 aaPredicted RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 ZNF544Q6NX49 715 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 SARM1Q6SZW1 724 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 RD3Q7Z3Z2 195 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 SP8Q8IXZ3 490 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 MB21D2Q8IYB1 491 aaPredicted RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 INPP5DQ92835 1189 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 EMILIN2Q9BXX0 1053 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 EPN3Q9H201 632 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 IGFLR1Q9H665 355 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 CYP4F11Q9HBI6 524 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 ADGRA2Q96PE1 1338 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 POLRMTO00411 1230 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 KIAA0391O15091 583 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 STX7O15400 261 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 KCNN4O15554 427 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 KRT16P08779 473 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 NPEPPSP55786 919 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 EIF3EP60228 445 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 RUNX1T1Q06455 604 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 BAATQ14032 418 aaPredicted RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 INPP5AQ14642 412 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 KNOP1Q1ED39 458 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 KIRREL3Q8IZU9 778 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 POMGNT2Q8NAT1 580 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 CALML6Q8TD86 181 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PAGE5Q96GU1 130 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 DNAJC1Q96KC8 554 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 ADNPQ9H2P0 1102 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 ZFP69BQ9UJL9 534 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 MINPP1Q9UNW1 487 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 NCKAP1Q9Y2A7 1128 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PCDHB6Q9Y5E3 794 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PCDHGA4Q9Y5G9 962 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 MROH7-TTC4A0A0A0MT08 1334 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 GPR182O15218 404 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 CYTH3O43739 400 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PRMT3O60678 531 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PBLDP30039 288 aaPredicted RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 WEE1P30291 646 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 YWHABP31946 246 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 PMS2P54278 862 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 EPHB3P54753 998 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 KCNH2Q12809 1159 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PRKAA1Q13131 559 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 SGCGQ13326 291 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 GSTA3Q16772 222 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 HORMAD1Q86X24 394 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 LPAR1Q92633 364 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 VPS50Q96JG6 964 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 L3MBTL3Q96JM7 780 aaPredicted RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 NMRK2Q9NPI5 230 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 STARD7Q9NQZ5 370 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 DDX28Q9NUL7 540 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 NWD1Q149M9 1564 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 ODC1P11926 461 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PDGFRAP16234 1089 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 ACADSBP45954 432 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PRIM2P49643 509 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 USP10Q14694 798 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 LMBRD2Q68DH5 695 aaPredicted RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 DEFB128Q7Z7B8 93 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 ZNF34Q8IZ26 560 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PCSK9Q8NBP7 692 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 RAD54LQ92698 747 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 FAM162AQ96A26 154 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 CLMNQ96JQ2 1002 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 BPIFA3Q9BQP9 254 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 INTS2Q9H0H0 1204 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 EXOSC4Q9NPD3 245 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 STMN3Q9NZ72 180 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 MSRAQ9UJ68 235 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 PSMD14O00487 310 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 NDUFA10O95299 355 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 RPS7P62081 194 aaKnown RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 EPHA7Q15375 998 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 ZNF746Q6NUN9 644 aaPredicted RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 NOTUMQ6P988 496 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 MTSS1LQ765P7 747 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PROM2Q8N271 834 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 TMEM143Q96AN5 459 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PDLIM2Q96JY6 352 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PPP1R36Q96LQ0 422 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 NLNQ9BYT8 704 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 CPVLQ9H3G5 476 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 WWOXQ9NZC7 414 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 CEP72Q9P209 647 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 ATP6V1HQ9UI12 483 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 POTEFA5A3E0 1075 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 CYP7B1O75881 506 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 RHOBTB1O94844 696 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms