RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ZCWPW1Q9H0M4 648 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 SLITRK6Q9H5Y7 841 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 RPF1Q9H9Y2 349 aaKnown RBP17.27■□□□□ 0.36
RAB40C-202ENST00000509637 TMLHEQ9NVH6 421 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 DENND4CQ5VZ89 1909 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 SPECC1L-ADORA2AF8WAN1 911 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 GDF9O60383 454 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 PLCG1P19174 1290 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 EPHB3P54753 998 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 MLLT6P55198 1093 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-202ENST00000509637 GTF2BQ00403 316 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 PON2Q15165 354 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 ARL6IP4Q66PJ3 421 aaKnown RBP17.26■□□□□ 0.35
RAB40C-202ENST00000509637 NAIF1Q69YI7 327 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-202ENST00000509637 HEATR6Q6AI08 1181 aaKnown RBP17.26■□□□□ 0.35
RAB40C-202ENST00000509637 EFCAB13Q8IY85 973 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 SPEM1Q8N4L4 309 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 MYCT1Q8N699 235 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 GIPC2Q8TF65 315 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 ATXN3LQ9H3M9 355 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 KCND2Q9NZV8 630 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 LARSQ9P2J5 1176 aaKnown RBP17.26■□□□□ 0.35
RAB40C-202ENST00000509637 ODF2LQ9ULJ1 636 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 USP18Q9UMW8 372 aa17.26■□□□□ 0.35
RAB40C-202ENST00000509637 NUP210Q8TEM1 1887 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-202ENST00000509637 K7ENM7 598 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 HNRNPDLO14979 420 aaKnown RBP17.25■□□□□ 0.35
RAB40C-202ENST00000509637 TRAK2O60296 914 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 KRT37O76014 449 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 ADSSP30520 456 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 GPR15P49685 360 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 CCR3P51677 355 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 KCNA1Q09470 495 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 CCINQ13939 588 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 CCDC142Q17RM4 750 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 SLC39A12Q504Y0 691 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 WSCD1Q658N2 575 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 USP37Q86T82 979 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 CELF5Q8N6W0 485 aaKnown RBP17.25■□□□□ 0.35
RAB40C-202ENST00000509637 RAD54LQ92698 747 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 MSTO1Q9BUK6 570 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 GPR88Q9GZN0 384 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 FBRSL1Q9HCM7 1045 aaKnown RBP17.25■□□□□ 0.35
RAB40C-202ENST00000509637 HPS4Q9NQG7 708 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 CCL26Q9Y258 94 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 STYXL1Q9Y6J8 313 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 RALGAPA1Q6GYQ0 2036 aa17.25■□□□□ 0.35
RAB40C-202ENST00000509637 EXTL3O43909 919 aa17.24■□□□□ 0.35
RAB40C-202ENST00000509637 HMGA1P17096 107 aaKnown RBP17.24■□□□□ 0.35
RAB40C-202ENST00000509637 ALDH1A3P47895 512 aa17.24■□□□□ 0.35
RAB40C-202ENST00000509637 KPNA1P52294 538 aaPredicted RBP17.24■□□□□ 0.35
RAB40C-202ENST00000509637 PRR23BQ6ZRT6 265 aa17.24■□□□□ 0.35
RAB40C-202ENST00000509637 KCTD17Q8N5Z5 321 aa17.24■□□□□ 0.35
RAB40C-202ENST00000509637 STRA6Q9BX79 667 aa17.24■□□□□ 0.35
RAB40C-202ENST00000509637 CACNA1BQ00975 2339 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 ANTXRLA6NF34 631 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 PPP1R37O75864 691 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 FAM13AO94988 1023 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 PAPSS2O95340 614 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-202ENST00000509637 F11P03951 625 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 HAPLN1P10915 354 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-202ENST00000509637 PXNP49023 591 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-202ENST00000509637 SDHAF4Q5VUM1 108 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 LAIR1Q6GTX8 287 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 GPR161Q8N6U8 529 aaKnown RBP17.23■□□□□ 0.35
RAB40C-202ENST00000509637 CXorf38Q8TB03 319 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 CSGALNACT1Q8TDX6 532 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 E2F7Q96AV8 911 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 EPSTI1Q96J88 318 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 CDK5RAP3Q96JB5 506 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 SEPT5Q99719 369 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-202ENST00000509637 FAM83CQ9BQN1 747 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 IER2Q9BTL4 223 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 OXCT2Q9BYC2 517 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-202ENST00000509637 TASP1Q9H6P5 420 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 C8orf33Q9H7E9 229 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-202ENST00000509637 PARVGQ9HBI0 331 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 GKN1Q9NS71 199 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 RXFP3Q9NSD7 469 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 KCNG1Q9UIX4 513 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 ASB3Q9Y575 518 aa17.23■□□□□ 0.35
RAB40C-202ENST00000509637 OBSL1O75147 1896 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 EML5Q05BV3 1969 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 CYB561D2O14569 222 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 HCRTO43612 131 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 RETP07949 1114 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 ODC1P11926 461 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 WEE1P30291 646 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 NRLP54845 237 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 LMNB2Q03252 620 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 PLD1Q13393 1074 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 SIM2Q14190 667 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-202ENST00000509637 TMEM132DQ14C87 1099 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 TRIM68Q6AZZ1 485 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 FSTL4Q6MZW2 842 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 RALGPS2Q86X27 583 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-202ENST00000509637 YAF2Q8IY57 180 aa17.22■□□□□ 0.35
RAB40C-202ENST00000509637 FAM160A2Q8N612 972 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-202ENST00000509637 BPIFB1Q8TDL5 484 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms