RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CCDC183Q5T5S1 534 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 TPGS2Q68CL5 300 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 OVOS1Q6IE37 1185 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 IQCEQ6IPM2 695 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 RTL10Q7L3V2 364 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 BMP8AQ7Z5Y6 402 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 THEM5Q8N1Q8 247 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 FBXL6Q8N531 539 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 TRIML1Q8N9V2 468 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 XXYLT1Q8NBI6 393 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 ST13P5Q8NFI4 369 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 RSAD2Q8WXG1 361 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 SENP8Q96LD8 212 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 ZNF512Q96ME7 567 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 PGLYRP2Q96PD5 576 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 OXCT2Q9BYC2 517 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 MTMR12Q9C0I1 747 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 RMND1Q9NWS8 449 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 EPS15L1Q9UBC2 864 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 AFF4Q9UHB7 1163 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 CDH7Q9ULB5 785 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 MRPS23Q9Y3D9 190 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 C2orf16Q68DN1 1984 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 ZNF233A6NK53 670 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 OR6C75A6NL08 312 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 PIRO00625 290 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 CYB561D2O14569 222 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 HCRTO43612 131 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 N4BP1O75113 896 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 ABLIM3O94929 683 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 OAZ2O95190 189 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 CST3P01034 146 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 OR4Q2P0C623 313 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 LAMP2P13473 410 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 TYMPP19971 482 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 AARSP49588 968 aaKnown RBP eCLIP9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 TAF6P49848 677 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 CLDN10P78369 228 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 NCAPHQ15003 741 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 CCDC142Q17RM4 750 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 EDRF1Q3B7T1 1238 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 SV2CQ496J9 727 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 CYP4A22Q5TCH4 519 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 TDRD10Q5VZ19 366 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 RNF19BQ6ZMZ0 732 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 HS2ST1Q7LGA3 356 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 NT5DC4Q86YG4 428 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 TCEAL8Q8IYN2 117 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 CSGALNACT2Q8N6G5 542 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 FLCNQ8NFG4 579 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 PARD3BQ8TEW8 1205 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 ING5Q8WYH8 240 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 NXPE3Q969Y0 559 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 ASIC4Q96FT7 647 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 ZNF560Q96MR9 790 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 CORO1BQ9BR76 489 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 INTS13Q9NVM9 706 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 HCFC1R1Q9NWW0 138 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 DNMT3BQ9UBC3 853 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 DSEQ9UL01 958 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 AGAP1Q9UPQ3 857 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 INSL5Q9Y5Q6 135 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 ZFP37Q9Y6Q3 630 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 TRIOO75962 3097 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 DOCK6Q96HP0 2047 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 PTPRDP23468 1912 aa9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 MTCL1Q9Y4B5 1905 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-213ENST00000509357 GOLGA6L22H0YM25 854 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 ZNF197O14709 1029 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 KIAA0391O15091 583 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 TBC1D4O60343 1298 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 EXOC3O60645 756 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 CLSTN1O94985 981 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 SEC24AO95486 1093 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 TNNC2P02585 160 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 C4BPAP04003 597 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 ITGB3P05106 788 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 RHOP08100 348 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 CFHP08603 1231 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 POU2F2P09086 479 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 TMEM191BP0C7N4 346 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 POLR2BP30876 1174 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 PNPLA4P41247 253 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 ALDH1A3P47895 512 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 EPHB3P54753 998 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 SNRPFP62306 86 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 TWF1Q12792 350 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 PAK1Q13153 545 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 PLD1Q13393 1074 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 ADAM9Q13443 819 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 CBWD6Q4V339 395 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 CBWD3Q5JTY5 395 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 CBWD5Q5RIA9 395 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 CEP135Q66GS9 1140 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 PDZD4Q76G19 769 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 SLC44A3Q8N4M1 653 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 ITFG1Q8TB96 612 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 FAM200AQ8TCP9 573 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 SEMA4DQ92854 862 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 FGF13Q92913 245 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms