RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 IGHDP01880 384 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 SNRPB2P08579 225 aaKnown RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 SCG2P13521 617 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 ICAM3P32942 547 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 TRHRP34981 398 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 PLA2G5P39877 138 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 ECI1P42126 302 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 GRIA2P42262 883 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 LIFRP42702 1097 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 METAP2P50579 478 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 IRX6P78412 446 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 MRPS6P82932 125 aaKnown RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 ZNF200P98182 395 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 CDC42EP1Q00587 391 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 SETQ01105 290 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 SSRP1Q08945 709 aaKnown RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 SF1Q15637 639 aaKnown RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 LEXMQ3ZCV2 418 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 PLEKHG4Q58EX7 1191 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 CES5AQ6NT32 575 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 TSHZ1Q6ZSZ6 1077 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 CEP128Q6ZU80 1094 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 CBLL1Q75N03 491 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 CYB5R4Q7L1T6 521 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 TRMT1LQ7Z2T5 733 aaKnown RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 TMCO2Q7Z6W1 182 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 KSR1Q8IVT5 923 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 EXOC8Q8IYI6 725 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 OXR1Q8N573 874 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 ANKS4BQ8N8V4 417 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 RNF169Q8NCN4 708 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 PDZD8Q8NEN9 1154 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 LMBR1Q8WVP7 490 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 DNAJB3Q8WWF6 145 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 KAT2BQ92831 832 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 TOP1MTQ969P6 601 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 PABPC5Q96DU9 382 aaKnown RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 MAP6Q96JE9 813 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 FAM167AQ96KS9 214 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 INPP4AQ96PE3 977 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 DNAJC7Q99615 494 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 PRRX2Q99811 253 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 ZNF577Q9BSK1 485 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 C16orf70Q9BSU1 422 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 MYL10Q9BUA6 226 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 G6PC3Q9BUM1 346 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 C22orf23Q9BZE7 217 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 TLE6Q9H808 572 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 ATP6V0A4Q9HBG4 840 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 GPRC5CQ9NQ84 441 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 ENTPD7Q9NQZ7 604 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 ZNF302Q9NR11 478 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 C1orf112Q9NSG2 853 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 TBC1D22BQ9NU19 505 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 COL20A1Q9P218 1284 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 PCDHA6Q9UN73 950 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 ZNF281Q9Y2X9 895 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 PCDHA8Q9Y5H6 950 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 TRPV2Q9Y5S1 764 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 CDY2AQ9Y6F7 541 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 ADGRA3Q8IWK6 1321 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 KLF18A0A0U1RQI7 1052 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 LCHNA4D1U4 455 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 FITM1A5D6W6 292 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 TBKBP1A7MCY6 615 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 HAS3O00219 553 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 MAGEB2O15479 319 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 FGF10O15520 208 aaPredicted RBP4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 SGSM2O43147 1006 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 HBP1O60381 514 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 CDC45O75419 566 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 CDKL5O76039 1030 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 THBDP07204 575 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 INSRRP14616 1297 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 LAG3P18627 525 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 RXRAP19793 462 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 CD52P31358 61 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 PPM1AP35813 382 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 BMPR1AP36894 532 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 ALDH7A1P49419 539 aaKnown RBP4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 NLRP5P59047 1200 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 ACTR2P61160 394 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 SP2Q02086 613 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 CHRNEQ04844 493 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 RNASELQ05823 741 aaKnown RBP4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 TMEM62Q0P6H9 643 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 TROAPQ12815 778 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 LAPTM5Q13571 262 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 HSP90AA2PQ14568 343 aaPredicted RBP4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 SEC23AQ15436 765 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 CLUL1Q15846 466 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 SLC14A2Q15849 920 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 PAN2Q504Q3 1202 aaKnown RBP4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 CEP55Q53EZ4 464 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 TCEAL5Q5H9L2 206 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 ZNF484Q5JVG2 852 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 CREB3L3Q68CJ9 461 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 KRT40Q6A162 431 aa4.22□□□□□ -1.73
HMGN1P11-201ENST00000508668 WWC2Q6AWC2 1192 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms