RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 RPL9P32969 192 aaKnown RBP17.11■□□□□ 0.33
NFKB1-207ENST00000508584 INCA1Q0VD86 236 aa17.11■□□□□ 0.33
NFKB1-207ENST00000508584 GRIK3Q13003 919 aa17.11■□□□□ 0.33
NFKB1-207ENST00000508584 SYT10Q6XYQ8 523 aa17.11■□□□□ 0.33
NFKB1-207ENST00000508584 IRX2Q9BZI1 471 aaPredicted RBP17.11■□□□□ 0.33
NFKB1-207ENST00000508584 PDCL3Q9H2J4 239 aa17.11■□□□□ 0.33
NFKB1-207ENST00000508584 ELAC1Q9H777 363 aaKnown RBP17.11■□□□□ 0.33
NFKB1-207ENST00000508584 TMEM161AQ9NX61 479 aa17.11■□□□□ 0.33
NFKB1-207ENST00000508584 GDAP2Q9NXN4 497 aa17.11■□□□□ 0.33
NFKB1-207ENST00000508584 MYO1AQ9UBC5 1043 aa17.11■□□□□ 0.33
NFKB1-207ENST00000508584 BARX2Q9UMQ3 279 aaPredicted RBP17.11■□□□□ 0.33
NFKB1-207ENST00000508584 PODXLO00592 558 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 SPTLC1O15269 473 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 RTN2O75298 545 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 POMCP01189 267 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 GZMAP12544 262 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 RFC2P35250 354 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 RAD23BP54727 409 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 CLEC16AQ2KHT3 1053 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 TCTN1Q2MV58 587 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 ZNF394Q53GI3 561 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 TRIM72Q6ZMU5 477 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 WHAMMQ8TF30 809 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 ZNF592Q92610 1267 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 SECISBP2LQ93073 1101 aaKnown RBP17.1■□□□□ 0.33
NFKB1-207ENST00000508584 ELOVL4Q9GZR5 314 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 ISCUQ9H1K1 167 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 TAS2R14Q9NYV8 317 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 DNAI1Q9UI46 699 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 PAXBP1Q9Y5B6 917 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 DUSP10Q9Y6W6 482 aa17.1■□□□□ 0.33
NFKB1-207ENST00000508584 MACROD2A1Z1Q3 448 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 BTNL10A8MVZ5 291 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 TIMP1P01033 207 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 TMEM253P0C7T8 217 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 BRD2P25440 801 aaKnown RBP17.09■□□□□ 0.33
NFKB1-207ENST00000508584 NDST1P52848 882 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 EPHB4P54760 987 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 GALCP54803 685 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 LILRA4P59901 499 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 TUSC3Q13454 348 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 SOWAHAQ2M3V2 549 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 CLLU1OSQ5K130 101 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 ZNF569Q5MCW4 686 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.09■□□□□ 0.33
NFKB1-207ENST00000508584 DEFB128Q7Z7B8 93 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 DNAAF5Q86Y56 855 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 SLC4A11Q8NBS3 891 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 ZNF606Q8WXB4 792 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 DDX27Q96GQ7 796 aaKnown RBP17.09■□□□□ 0.33
NFKB1-207ENST00000508584 TMEM176AQ96HP8 235 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 UROC1Q96N76 676 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 TWNKQ96RR1 684 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 CDX2Q99626 313 aaPredicted RBP17.09■□□□□ 0.33
NFKB1-207ENST00000508584 MRPL45Q9BRJ2 306 aaKnown RBP17.09■□□□□ 0.33
NFKB1-207ENST00000508584 HMGXB4Q9UGU5 601 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 PCDHB7Q9Y5E2 793 aa17.09■□□□□ 0.33
NFKB1-207ENST00000508584 ANKRD62A6NC57 917 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 CASTOR2A6NHX0 329 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 MED7O43513 233 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 HUS1O60921 280 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 TACC1O75410 805 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 FTLP02792 175 aaPredicted RBP17.08■□□□□ 0.32
NFKB1-207ENST00000508584 FGFR1P11362 822 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 CD19P15391 556 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 CLCNKBP51801 687 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 NOMO2Q5JPE7 1267 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 ACAD10Q6JQN1 1059 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 LIMS2Q7Z4I7 341 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 RNF10Q8N5U6 811 aaKnown RBP17.08■□□□□ 0.32
NFKB1-207ENST00000508584 TOP6BLQ8N6T0 577 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 APPL2Q8NEU8 664 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 KIF18AQ8NI77 898 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 CTNNBL1Q8WYA6 563 aaPredicted RBP17.08■□□□□ 0.32
NFKB1-207ENST00000508584 TFAP2BQ92481 460 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 WDR24Q96S15 920 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 ZSWIM1Q9BR11 485 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 NT5C1AQ9BXI3 368 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 CACNG4Q9UBN1 327 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 LRFN2Q9ULH4 789 aa17.08■□□□□ 0.32
NFKB1-207ENST00000508584 PDCD11Q14690 1871 aaKnown RBP17.07■□□□□ 0.32
NFKB1-207ENST00000508584 COL6A3P12111 3177 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 NCANO14594 1321 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 CYP1A1P04798 512 aaPredicted RBP17.07■□□□□ 0.32
NFKB1-207ENST00000508584 CFHP08603 1231 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 FAM163BP0C2L3 166 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 UNGP13051 313 aaPredicted RBP17.07■□□□□ 0.32
NFKB1-207ENST00000508584 CASQ1P31415 396 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 ORC1Q13415 861 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 UPP1Q16831 310 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 MFSD5Q6N075 450 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 CNKSR3Q6P9H4 555 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 DPH6Q7L8W6 267 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 UNC93AQ86WB7 457 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
NFKB1-207ENST00000508584 SLC35F6Q8N357 371 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 NOX5Q96PH1 765 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 SNX25Q9H3E2 840 aa17.07■□□□□ 0.32
NFKB1-207ENST00000508584 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms