RNA–Protein interactions for RNA: ENST00000508284.5

SQSTM1-212, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-212ENST00000508284 PGLYRP2Q96PD5 576 aa19.44■□□□□ 0.7
SQSTM1-212ENST00000508284 KXD1Q9BQD3 176 aa19.44■□□□□ 0.7
SQSTM1-212ENST00000508284 TBC1D17Q9HA65 648 aa19.44■□□□□ 0.7
SQSTM1-212ENST00000508284 AVENQ9NQS1 362 aaPredicted RBP19.44■□□□□ 0.7
SQSTM1-212ENST00000508284 OLFML3Q9NRN5 406 aa19.44■□□□□ 0.7
SQSTM1-212ENST00000508284 EXOC1Q9NV70 894 aa19.44■□□□□ 0.7
SQSTM1-212ENST00000508284 DACH1Q9UI36 760 aa19.44■□□□□ 0.7
SQSTM1-212ENST00000508284 C2CD2Q9Y426 696 aa19.44■□□□□ 0.7
SQSTM1-212ENST00000508284 PPP1R37O75864 691 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 RHOBTB3O94955 611 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 CEBPBP17676 345 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 ADSSP30520 456 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 POU5F1Q01860 360 aaKnown RBP19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 KCNA1Q09470 495 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 ALCAMQ13740 583 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 DPCR1Q3MIW9 517 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 ANO6Q4KMQ2 910 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 ARMCX5Q6P1M9 558 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 GAS2L3Q86XJ1 694 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 CCDC65Q8IXS2 484 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 MLKLQ8NB16 471 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 STRA6Q9BX79 667 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 NAT10Q9H0A0 1025 aaKnown RBP19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 DPP3Q9NY33 737 aa19.43■□□□□ 0.7
SQSTM1-212ENST00000508284 FRMD3A2A2Y4 597 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 PIRO00625 290 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 IL18RAPO95256 599 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 GPR17Q13304 367 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 KMT5BQ4FZB7 885 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 METTL23Q86XA0 190 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 CCDC105Q8IYK2 499 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 FAM200AQ8TCP9 573 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 NOC3LQ8WTT2 800 aaKnown RBP19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 TCEAL4Q96EI5 215 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 SAAL1Q96ER3 474 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 SHDQ96IW2 340 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 FAM213AQ9BRX8 229 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 ASAH2Q9NR71 780 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 YIPF1Q9Y548 306 aa19.42■□□□□ 0.7
SQSTM1-212ENST00000508284 ANO9A1A5B4 782 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 SPTLC1O15269 473 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 LDHAP00338 332 aaKnown RBP19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 MYL4P12829 197 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 TAF6P49848 677 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 CASP5P51878 434 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 PFKPQ01813 784 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 EHHADHQ08426 723 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 DUSP4Q13115 394 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 PLD1Q13393 1074 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 MYBPC2Q14324 1141 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 CT47A1Q5JQC4 288 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 ZNF658Q5TYW1 1059 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 PHLDB3Q6NSJ2 640 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 CRELD2Q6UXH1 353 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 HS6ST3Q8IZP7 471 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 DTWD2Q8NBA8 298 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 LEMD2Q8NC56 503 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 BPIFA3Q9BQP9 254 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 DNAJC25Q9H1X3 360 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 TMEM206Q9H813 350 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 CEP72Q9P209 647 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 DSEQ9UL01 958 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 SIT1Q9Y3P8 196 aa19.41■□□□□ 0.7
SQSTM1-212ENST00000508284 GOLGA6L3A6NEY3 463 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 CYB561D2O14569 222 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 ECI2O75521 394 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 MICAL2O94851 1124 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 BMP6P22004 513 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 GARTP22102 1010 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 PPP1R2P41236 205 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 ALDH1A3P47895 512 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 EPHB3P54753 998 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 PRSS36Q5K4E3 855 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 C11orf57Q6ZUT1 292 aaPredicted RBP19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 STXBP4Q6ZWJ1 553 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 NT5DC4Q86YG4 428 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 THEM5Q8N1Q8 247 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 SLC27A5Q9Y2P5 690 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 NOTCH4Q99466 2003 aa19.4■□□□□ 0.7
SQSTM1-212ENST00000508284 PRPF6O94906 941 aaKnown RBP19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 CCR2P41597 374 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 ZNF165P49910 485 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 TFAMQ00059 246 aaKnown RBP19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 PSMD2Q13200 908 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 ANGPT1Q15389 498 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 SLC44A4Q53GD3 710 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 COBLL1Q53SF7 1204 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 TANGO2Q6ICL3 276 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 EFCAB13Q8IY85 973 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 PCIF1Q9H4Z3 704 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 SLITRK6Q9H5Y7 841 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 ZFP14Q9HCL3 533 aa19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 RBAKQ9NYW8 714 aaPredicted RBP19.39■□□□□ 0.69
SQSTM1-212ENST00000508284 MTMR11A4FU01 709 aa19.38■□□□□ 0.69
SQSTM1-212ENST00000508284 GOLGA8IPA6NC78 632 aa19.38■□□□□ 0.69
SQSTM1-212ENST00000508284 GOLGA8JA6NMD2 632 aa19.38■□□□□ 0.69
SQSTM1-212ENST00000508284 CYP11A1P05108 521 aa19.38■□□□□ 0.69
SQSTM1-212ENST00000508284 DCNP07585 359 aaKnown RBP19.38■□□□□ 0.69
SQSTM1-212ENST00000508284 STARD6P59095 220 aa19.38■□□□□ 0.69
SQSTM1-212ENST00000508284 PRKCQQ04759 706 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms