RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ANKRD20A4Q4UJ75 823 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 ACSBG2Q5FVE4 666 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 C6orf118Q5T5N4 469 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 LMBRD2Q68DH5 695 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 ELMOD2Q8IZ81 293 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 CCDC89Q8N998 374 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 LHFPL5Q8TAF8 219 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 ENKURQ8TC29 256 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 ACTRT2Q8TDY3 377 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 SNX29Q8TEQ0 813 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 STMN2Q93045 179 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 APOL5Q9BWW9 433 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 GON7Q9BXV9 100 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 SH2D4AQ9H788 454 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 RSL24D1Q9UHA3 163 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 CEPT1Q9Y6K0 416 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 SPHKAPQ2M3C7 1700 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 MAP3K19Q56UN5 1328 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 TRDMT1O14717 391 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 CSDE1O75534 798 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 ZWINTO95229 277 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 C8BP07358 591 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 FAM228BP0C875 321 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 ATF7P17544 494 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 RCVRNP35243 200 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 CYLC1P35663 651 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 IARSP41252 1262 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 PTPN9P43378 593 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 PLCD1P51178 756 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 AP2S1P53680 142 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 PRKCQQ04759 706 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 RNASELQ05823 741 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 CNGA2Q16280 664 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 PLA2G4EQ3MJ16 856 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 DCAF6Q58WW2 860 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 ZNF449Q6P9G9 518 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 NOSTRINQ8IVI9 506 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 VGLL2Q8N8G2 317 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 CIDECQ96AQ7 238 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 TM9SF2Q99805 663 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 MYD88Q99836 296 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 C17orf80Q9BSJ5 609 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 RHOBTB2Q9BYZ6 727 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 TXLNGYQ9BZA5 131 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 DPEP3Q9H4B8 488 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 TBC1D14Q9P2M4 693 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 POLG2Q9UHN1 485 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 MAD1L1Q9Y6D9 718 aa11.34□□□□□ -0.59
PDLIM5-210ENST00000508216 C17orf113A0A1B0GUU1 675 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 A0A1W2PRQ8 180 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 FYB1O15117 783 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 DENRO43583 198 aaKnown RBP11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 ITM2AO43736 263 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 PEX1O43933 1283 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 GMNNO75496 209 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 FOSP01100 380 aaPredicted RBP11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 PFKFB1P16118 471 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 ZNF3P17036 446 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 HSPA13P48723 471 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 RAP1GDS1P52306 607 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 PEX3P56589 373 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 PRSS12P56730 875 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 BPIFB3P59826 476 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 STX1BP61266 288 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 CDC20Q12834 499 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 KRT81Q14533 505 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 SEMA3AQ14563 771 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 MTFR1Q15390 333 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 C12orf60Q5U649 245 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 TATDN1Q6P1N9 297 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 USP50Q70EL3 339 aaPredicted RBP11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 PJA1Q8NG27 643 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 CHAC2Q8WUX2 184 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 HSPH1Q92598 858 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 SLC39A13Q96H72 371 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 TRIM47Q96LD4 638 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 MED15Q96RN5 788 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 SLC4A5Q9BY07 1137 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 MROQ9BYG7 248 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 RBM12Q9NTZ6 932 aaKnown RBP11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 ERGIC3Q9Y282 383 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 STARD13Q9Y3M8 1113 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 PCDHGA8Q9Y5G5 932 aa11.33□□□□□ -0.59
PDLIM5-210ENST00000508216 USP42Q9H9J4 1324 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 A0A087WZG4 1122 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 PLEKHG3A1L390 1219 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 H7C0C1 242 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 RNF103O00237 685 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 HOXA2O43364 376 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 CCDC22O60826 627 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 ADAM11O75078 769 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 ITGAXP20702 1163 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 RPS6KB1P23443 525 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 GSTM2P28161 218 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 EPHB2P29323 1055 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 HNF1BP35680 557 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 TNNC1P63316 161 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms