RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 C3orf20Q8ND61 904 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 PARP2Q9UGN5 583 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 PLAAQ9Y263 795 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 MED7O43513 233 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 CILPO75339 1184 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 ITGB3P05106 788 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 ZNF252P-AS1Q0IIN9 211 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 SCARA5Q6ZMJ2 495 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 SYDE1Q6ZW31 735 aaPredicted RBP18.73■□□□□ 0.59
SFXN1-208ENST00000507823 KAT2BQ92831 832 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 HERPUD2Q9BSE4 406 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 DERAQ9Y315 318 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 CEP83Q9Y592 693 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 DOCK3Q8IZD9 2030 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 NRCAMQ92823 1304 aa18.73■□□□□ 0.59
SFXN1-208ENST00000507823 LMAN1P49257 510 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 INCA1Q0VD86 236 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 TMEM132DQ14C87 1099 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 ACAP3Q96P50 834 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 PLEKHA5Q9HAU0 1116 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 RRAGCQ9HB90 399 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 NXF1Q9UBU9 619 aaKnown RBP18.72■□□□□ 0.59
SFXN1-208ENST00000507823 STRIP2Q9ULQ0 834 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 SMIM35A0A1B0GVV1 85 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 GPR32O75388 356 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 ERLIN2O94905 339 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 ZNF865P0CJ78 1059 aaPredicted RBP18.72■□□□□ 0.59
SFXN1-208ENST00000507823 RPL21P46778 160 aaKnown RBP18.72■□□□□ 0.59
SFXN1-208ENST00000507823 ADAM17P78536 824 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 LACTBP83111 547 aaPredicted RBP18.72■□□□□ 0.59
SFXN1-208ENST00000507823 SKOR1P84550 965 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 WDR72Q3MJ13 1102 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 ZNF394Q53GI3 561 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 SLC4A11Q8NBS3 891 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 ADPGKQ9BRR6 497 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 HOMER3Q9NSC5 361 aa18.72■□□□□ 0.59
SFXN1-208ENST00000507823 HAS3O00219 553 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 KRT14P02533 472 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 KRT19P08727 400 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 HOXA11P31270 313 aaPredicted RBP18.71■□□□□ 0.59
SFXN1-208ENST00000507823 RPL7AP62424 266 aaKnown RBP18.71■□□□□ 0.59
SFXN1-208ENST00000507823 SGO2Q562F6 1265 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 DENND1BQ6P3S1 775 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 DNAJC24Q6P3W2 148 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 TTC39CQ8N584 583 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 TMBIM4Q9HC24 238 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 SNX24Q9Y343 169 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 O00370 1275 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 P4HA1P13674 534 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 PTPN7P35236 360 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 ERICH1Q86X53 443 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 RASAL3Q86YV0 1011 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 PPP1R16BQ96T49 567 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 DCLK3Q9C098 648 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 ELOVL4Q9GZR5 314 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 SMYD3Q9H7B4 428 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 SETD4Q9NVD3 440 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 PRDM4Q9UKN5 801 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 PASKQ96RG2 1323 aa18.71■□□□□ 0.59
SFXN1-208ENST00000507823 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 ECEL1O95672 775 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 SMIM10L2AP0DMW4 78 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 SMIM10L2BP0DMW5 78 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 RAP1GAPP47736 663 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 DHX9Q08211 1270 aaKnown RBP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 PIGHQ14442 188 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 CCDC105Q8IYK2 499 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 FNIP1Q8TF40 1166 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 ART4Q93070 314 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 TRIM31Q9BZY9 425 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 CPA4Q9UI42 421 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 Q9Y3F1 56 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 MANSC4A6NHS7 340 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 ITGBL1O95965 494 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 RBP5P82980 135 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 OGDHQ02218 1023 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 PTPN11Q06124 597 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 PTPN20Q4JDL3 420 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 OLFML2BQ68BL8 750 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 APBB1IPQ7Z5R6 666 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 FBXO25Q8TCJ0 367 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 HPDLQ96IR7 371 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 GCOM2Q9BZD3 368 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 EPB41L4BQ9H329 900 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 FLRT1Q9NZU1 646 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 CYTH4Q9UIA0 394 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 HMGB1P1B2RPK0 211 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 DYNC1LI2O43237 492 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 GJB6O95452 261 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 POLR2BP30876 1174 aaKnown RBP18.7■□□□□ 0.58
SFXN1-208ENST00000507823 GABRB2P47870 512 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 CDH8P55286 799 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 ZNF844Q08AG5 666 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 TMEM176AQ96HP8 235 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 ATP6V1G3Q96LB4 118 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 TWNKQ96RR1 684 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 OSBPL8Q9BZF1 889 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 WHRNQ9P202 907 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 WDR35Q9P2L0 1181 aa18.7■□□□□ 0.58
SFXN1-208ENST00000507823 NEU2Q9Y3R4 380 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms